Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_1500 |
Symbol | |
ID | 4538376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | - |
Start bp | 1479581 |
End bp | 1480411 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639746859 |
Product | prephenate dehydrogenase |
Protein accession | YP_892634 |
Protein GI | 118475497 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0287] Prephenate dehydrogenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGTAG GCATAATAGG TCTAGGACTT ATCGGAGGTT CTTTAGGTCT TGCTTTAAGA GATATGAAAC TTATAACAAA AGTAAGCGGA TATGATCTTA ATAAAGAAAA CGAGAGTGAC GCTTTGAAGC TCGGTTTAGT CGATGAGATA ATAGGCTTTG AAGAGATGAA AAAGAGATGC GATATGATAT TTTTGGCTAT TCCTGTGGAG GCCATTATCA AAATACTTCA AAATTTAAAA GATATACCAA AAAGTACGAC TATAATAGAT CTTGGTTCAA CCAAAGTAGA GATATTAAAA TCATGTCCGG ATGAGATAAA AGAGAACTTT GTGGCTGCTC ATCCTATGGC AGGAACTGAA AACTCAGGAC CTAAAGCGGC ATTTAAAACT CTTTTAAACG GTGCCGTAGT TGTCGTATGC GATGATAAAA ATGCAGGTGA AAATCACGTA AAAAGAGCAG TTGAGATACT ATCTCACGCA GGTATGAAGA TAGTTTTTAT GGATTCAAAA AGCCATGACC ATCATGTAGG AATTATATCT CATCTTCCTC ATATCATCAG TTACAGTCTT GTAAGCTCAA CTTTAAAAGA AGAGGATAAA AGAAATATAT TGCTTCTTGC TGGAGGTAGT TTTAGCGGAA TGGCTCGTAT AGCAAAGTCA AGTCCGCAAA TGTGGTCAGA TATATTTAAG CAAAATAAAT CCAACGTGTT AAACGCGATA AATTCTTTTA AAAAAGAGCT TGAAATTTGT GAGAATATGA TAGAAAACGA TCAGTGGGAT GAACTAAAAG CGTGGATGCA AACTGCTAGA GGATTGAGAG ATATTTTATA G
|
Protein sequence | MNVGIIGLGL IGGSLGLALR DMKLITKVSG YDLNKENESD ALKLGLVDEI IGFEEMKKRC DMIFLAIPVE AIIKILQNLK DIPKSTTIID LGSTKVEILK SCPDEIKENF VAAHPMAGTE NSGPKAAFKT LLNGAVVVVC DDKNAGENHV KRAVEILSHA GMKIVFMDSK SHDHHVGIIS HLPHIISYSL VSSTLKEEDK RNILLLAGGS FSGMARIAKS SPQMWSDIFK QNKSNVLNAI NSFKKELEIC ENMIENDQWD ELKAWMQTAR GLRDIL
|
| |