| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_1332 |
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| Symbol | pyrF |
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| ID | 4539001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter fetus subsp. fetus 82-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008599 |
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| Strand | - |
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| Start bp | 1316877 |
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| End bp | 1317560 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 639746699 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_892478 |
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| Protein GI | 118474303 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTAT GCGTAGCATT AGATCTTGCG AACTCTGATG AGTGTTTAAG AGTGGCAAGA
GAGCTAAAAG GTCTTGACGT ATGGCTTAAA GTCGGACTTA GAGCTTATTT AAGAGATGGT
TTTAAATTTA TAAATGAACT TAAAAATGTA GATAATTTTA AAATATTTTT AGATCTCAAA
GTGCATGATA TACCAAATAC TATGGCTGAT GCTTGTGAGG TTATCTCGCA AATAGGCGCA
GATATGATAA ATATCCATGC AAGCGCCGGA AGAGTTGCTA TGAATAGTGT TATGGAGAGA
TTGTCGAAAT TAAATAATCG TCCTTTGGTG TTGGCGGTTT CTGCTCTAAC TAGTTTTGAT
GAAGAGAGTT TTAGTGAGAT TTATGCAGCG CATATCAAAG AAAGTGTAGT TAAATTTTCA
AAAATTTCTT ATGAATGCGG TCTTGATGGA ATAGTATGTT CTGTTTATGA GAGCTTAGAT
ATAAAAAATG CTACTAGTAG CAATTTTCTT ACTCTTACTC CTGGAATTAG ACCTTTTGGC
GAGTCAAATG ATGATCAAAA GAGAGTAGCA AATTTAAAAA CAGCGATGAG CAACAAATCG
GATTTTATAG TTGTAGGACG ACCTATATAT CAATCTAAAA ATCCAAGAGA AATTACTGAA
AAAATCCTAT ATAATATAAC TTAA
|
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| Protein sequence | MKLCVALDLA NSDECLRVAR ELKGLDVWLK VGLRAYLRDG FKFINELKNV DNFKIFLDLK
VHDIPNTMAD ACEVISQIGA DMINIHASAG RVAMNSVMER LSKLNNRPLV LAVSALTSFD
EESFSEIYAA HIKESVVKFS KISYECGLDG IVCSVYESLD IKNATSSNFL TLTPGIRPFG
ESNDDQKRVA NLKTAMSNKS DFIVVGRPIY QSKNPREITE KILYNIT
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