Gene CFF8240_1217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCFF8240_1217 
Symbol 
ID4538845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter fetus subsp. fetus 82-40 
KingdomBacteria 
Replicon accessionNC_008599 
Strand
Start bp1200262 
End bp1200933 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content34% 
IMG OID639746587 
Productlipoprotein releasing system ATP-binding protein LolD 
Protein accessionYP_892375 
Protein GI118474314 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones78 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAGCACA TCGTAGAAGC TAAGGATCTA AATATCGGAT ATGAAAGAGA TCAAAATGTT 
ATAAATGGAG CAAATTTTAA CATAAACGTG AATGATTTTG TATTTATAAC AGGCAAAAGC
GGCAGTGGAA AATCTACGCT AATAAAATCT ATGTACGGAG ATATATCTGT AAATAGAGGC
AGTCTAATAG TATGTTTAAG CGAGCTTAAA GATATAAACA GATCAAGCTT GGCGCTTCTT
AGACAAAGAG TAGGAATAAT TTTTCAAGAT TTTAGACTTA TAAACGAGTG GAATGTTGAA
AAAAATGTAA TGCTTCCTCT TATAATTAAA GGTTATAACC AAAGTGTATG TAAAAAACAG
GCCGCAAAGC TGCTAAATCA TGTAAATTTA CTTCATAAAG CAGATAAATT TCCACTTGAA
CTAAGTGGCG GAGAGCAACA AAGAGTAGCT ATGGCAAGGG CTTTAGCGCA TAATCCTCAG
CTTCTGTTAT GTGATGAGCC TACAGGTAGT TTGGATGAGT ATTCAAGTGA TGTGATATGG
TCGCTTTTAA AGTCTGCTAG AGATGGTCTT GGAACTTGCG TTGTTGTTGT AACTCATAAA
ATTCCATCTA GCTTGAGAAC CGAGTATAGA CATTTTGAAC TATTAAATGG AGAGATAAAT
GAAATCATTT AA
 
Protein sequence
MQHIVEAKDL NIGYERDQNV INGANFNINV NDFVFITGKS GSGKSTLIKS MYGDISVNRG 
SLIVCLSELK DINRSSLALL RQRVGIIFQD FRLINEWNVE KNVMLPLIIK GYNQSVCKKQ
AAKLLNHVNL LHKADKFPLE LSGGEQQRVA MARALAHNPQ LLLCDEPTGS LDEYSSDVIW
SLLKSARDGL GTCVVVVTHK IPSSLRTEYR HFELLNGEIN EII