Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_1217 |
Symbol | |
ID | 4538845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | - |
Start bp | 1200262 |
End bp | 1200933 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639746587 |
Product | lipoprotein releasing system ATP-binding protein LolD |
Protein accession | YP_892375 |
Protein GI | 118474314 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 78 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAGCACA TCGTAGAAGC TAAGGATCTA AATATCGGAT ATGAAAGAGA TCAAAATGTT ATAAATGGAG CAAATTTTAA CATAAACGTG AATGATTTTG TATTTATAAC AGGCAAAAGC GGCAGTGGAA AATCTACGCT AATAAAATCT ATGTACGGAG ATATATCTGT AAATAGAGGC AGTCTAATAG TATGTTTAAG CGAGCTTAAA GATATAAACA GATCAAGCTT GGCGCTTCTT AGACAAAGAG TAGGAATAAT TTTTCAAGAT TTTAGACTTA TAAACGAGTG GAATGTTGAA AAAAATGTAA TGCTTCCTCT TATAATTAAA GGTTATAACC AAAGTGTATG TAAAAAACAG GCCGCAAAGC TGCTAAATCA TGTAAATTTA CTTCATAAAG CAGATAAATT TCCACTTGAA CTAAGTGGCG GAGAGCAACA AAGAGTAGCT ATGGCAAGGG CTTTAGCGCA TAATCCTCAG CTTCTGTTAT GTGATGAGCC TACAGGTAGT TTGGATGAGT ATTCAAGTGA TGTGATATGG TCGCTTTTAA AGTCTGCTAG AGATGGTCTT GGAACTTGCG TTGTTGTTGT AACTCATAAA ATTCCATCTA GCTTGAGAAC CGAGTATAGA CATTTTGAAC TATTAAATGG AGAGATAAAT GAAATCATTT AA
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Protein sequence | MQHIVEAKDL NIGYERDQNV INGANFNINV NDFVFITGKS GSGKSTLIKS MYGDISVNRG SLIVCLSELK DINRSSLALL RQRVGIIFQD FRLINEWNVE KNVMLPLIIK GYNQSVCKKQ AAKLLNHVNL LHKADKFPLE LSGGEQQRVA MARALAHNPQ LLLCDEPTGS LDEYSSDVIW SLLKSARDGL GTCVVVVTHK IPSSLRTEYR HFELLNGEIN EII
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