Gene CFF8240_1070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCFF8240_1070 
Symbol 
ID4538207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter fetus subsp. fetus 82-40 
KingdomBacteria 
Replicon accessionNC_008599 
Strand+ 
Start bp1070586 
End bp1071512 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content28% 
IMG OID639746443 
Productprepilin-type N-terminal cleavage/methylation domain-containing protein 
Protein accessionYP_892231 
Protein GI118475409 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.453512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGCG CATTTACTAT GATAGAACTA GTCGTAGCTA TAGTAATTTC TGGTATATTG 
CTATCTATAG GAGTTAAAAT ATTTGATGTA ATTTATACAA ATTACATTAG ACAAAAAAGT 
ATAGTAGAGC TAGAATCTAT ATCAAAAACA GTTATAGAGC AGATAGAAAA ACGACTATCA 
TACCGCATAA AACCGACTTT ATCAGTAAAT ATAGAAAATA AATATAAGCG TTTAGACAAA 
CTAACGGATG ACGATATAAA GACTAATAAA AAATATCCGA TTATATGGTA TATGCAAAGC 
TATGAAACAC AAAGAATATT TAACGATGAT AAAAGAATAC TCGGCTGGAG CGGATTTATA 
AATTTAGATA AAGATAAAAC ACATCCAGAT AAAACAGATA AAAATGAAGA AGTACTAACT 
ATCAACTCAC CGGGAAGTAA TTTTTCAAAG ATTGAAAATA TTATAAAAGA TTTGGGTTTT 
AGTGATCTTT TTATAGTATT TAAAGTAGAT CAGGGAAACA ACAATGATCA ATACTATAAT 
ATAAAATCAG ATGATAAAAA TCCTTTAGCA CATAAAATAA AAATTAAAAA TGATACGAAT 
TTAAATATAG ATAAACCGAA ATTTCTTGAA AAGAAAGATA CTAATAAATT AGAAATATCT 
GAGCTATACT ATCTATCTCA CTCCATAAAT CAACTTAGTA TAGATAAGGA TAACAATCTT 
TGGCTAACCG AATTTATTCC ATTTGGAAAT GATAATGGAA CGCACAAAGA AGTTAGGAAA 
AACGTATTAG CCGAAAACGT AAGCTCACTT AGATTTATGT ATCTAGGCGG AAGCGACTCT 
ATCTCTATAA AACTCTGCTT AGAAGATCCA AATTTTAAAA TAAAAGGTCA AAAATTAGAA 
GTTTGTAAAA CCCAGGTGGT GCAGTGA
 
Protein sequence
MKRAFTMIEL VVAIVISGIL LSIGVKIFDV IYTNYIRQKS IVELESISKT VIEQIEKRLS 
YRIKPTLSVN IENKYKRLDK LTDDDIKTNK KYPIIWYMQS YETQRIFNDD KRILGWSGFI 
NLDKDKTHPD KTDKNEEVLT INSPGSNFSK IENIIKDLGF SDLFIVFKVD QGNNNDQYYN 
IKSDDKNPLA HKIKIKNDTN LNIDKPKFLE KKDTNKLEIS ELYYLSHSIN QLSIDKDNNL 
WLTEFIPFGN DNGTHKEVRK NVLAENVSSL RFMYLGGSDS ISIKLCLEDP NFKIKGQKLE 
VCKTQVVQ