| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_0871 |
|---|
| Symbol | uvrB |
|---|
| ID | 4538462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter fetus subsp. fetus 82-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008599 |
|---|
| Strand | + |
|---|
| Start bp | 872702 |
|---|
| End bp | 874678 |
|---|
| Gene Length | 1977 bp |
|---|
| Protein Length | 658 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 639746257 |
|---|
| Product | excinuclease ABC subunit B |
|---|
| Protein accession | YP_892046 |
|---|
| Protein GI | 118475355 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
|---|
| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAAT TTGAGATATC TAGTAAATTT AAGCCAAGTG ATGATCAAGA AAAAGCCGTA
ACAAACATAG TAGATAGCAT AAGATCCGGA AATAAATTTA ACGTCCTTTT AGGAGTAACT
GGAAGCGGTA AAACTTTTAC GATGGCAAAT GTGATAAAAC GCCTAAATAT GCCGACTCTC
ATCATGACAC ACAACAAAAG CTTAGCCGCG CAGCTTTATA GCGAATTCAA AGGCTTTTTT
CCTAAAAATC ACGTCGAGTA TTTCATAAGC TACTATGATT ACTACCAACC TGAAGCCTAT
ATACCGCGCC AAGATCTTTT TATAGAAAAA GATAGCTCTA TAAATGAAGA ATTGGAGCGT
TTAAGACTTA GTGCGACTGC GAATTTGCTT GAGTTTGATG ATGTGGTAGT CGTGGCTTCC
GTATCTGCAA ACTACGGTTT AGGAAATCCT GCTGAATATA AAGGTATGGT TTTACTGCTG
AGTTTAGGTA TGAGCTTAAA TCAAAAAGAG TTACTTTTAA AACTAGTAGA TATGGGATAT
AAAAGAAACG ATGCGTACTT TGATCGTGGA GATTTTCGAG TAAATGGTGA CGTGGTAGAT
ATCTATCCAG CGTATTTTAA CGATGAAGCC ATCAGACTTG AGTTTTTTGG AGACGAGCTT
GACGCTATGT ATCACTTTGA CGTATTAGAA AATAAACGCA CTAAAGACGT TAGCAAATTT
ATACTATATG CAACAAGTCA GTTTATAGTC GGCGAAAATA GACTAAAACA AGCGATAAAA
GATATCGAGC TTGAACTTGA AGATAGGCTT GCATTTTATG AAAAAGAAAA TAGATTAGTC
GAGTATCAAA GGCTTAAGCA AAGAGTGGAA TTTGACCTTG AGATGCTCTC AAGCACCGGA
AGTACCAAAG GCGTAGAAAA TTACGCGCGT TATCTAACAG GGCAAAAAGC AGGAGAGACG
CCGTATTCTT TGTTTGATTA CTTTGAAGTG AGCGGCAAGG ACTATCTTGT TATAGTAGAT
GAAAGCCACG TGAGTTTGCC ACAATTTCGC GGAATGTACG CAGGCGATAG AAGTAGAAAA
GAGGTTTTAG TCGAGTACGG TTTCAGACTT CCTTCTGCGC TTGATAACAG ACCTTTGAAA
CTTGATGAGT TTATAGCAAA AAAGGCAAAC TATCTGTTTG TCTCAGCCAC TCCAAACCAG
TATGAGATAG ATCTCTCACA AGGTCATGTT TATGAGCAAA TACTTAGGCC TACCGGACTT
CTTGATCCAC GCATAGAAGT CATAAGTAGC GATAATCAAG TAGAAGTTTT GTTTGATAGG
GCAAAAGCAG TCATAGCAAG AGGCGAAAGA GTGCTAGTAA CGACTCTAAC TAAAAAGATG
AGTGAAGAGC TAACGCGCTA CTACCAAGAA CTTGGTATCA AGGTCAAATA CATGCACTCA
GACATCGACG CAGTCGAAAG AAACGAGCTT ATAAGAGGTC TTAGAAAAGG GGAGTTCGAT
ATGCTTGTTG GTATAAATTT ACTCCGTGAG GGGCTAGATC TACCAGAAGT CTCTTTGGTA
GCTGTTTTAG ACGCCGACAA AGAGGGCTTT TTAAGAAGTC GTACAAGCCT CATACAAACT
ATGGGAAGAG CAGCTAGAAA CGTAAATGGA ACGGTTATAT TATTTGCAAA TAAAATAACA
AATTCTATGA AAGAAGCCAT AGATACAACT GAAGCAAGGC GTAAATATCA GGGCGATTAT
AACAAAAAGT ACGGTATAAC TCCGCGCTCG GCTAGTAGAA ATTTAGAAGA TAGCTTAAAA
GAAGAAGATC TACCAAATTT ATATAACAAA GCCAAAAAAT TAGAAAAAAT GCCGGCGAGT
GAGCGAGCAA AAATCGTAAA AGAACTAAGA AAACAGATGC TTGAAGCGGC TAAGAATTTG
GAATTTGAAA AAGCTGCGGC TCTAAGAGAC GAGATAGCAA AACTTAGAGA GCTTTAA
|
|---|
| Protein sequence | MDKFEISSKF KPSDDQEKAV TNIVDSIRSG NKFNVLLGVT GSGKTFTMAN VIKRLNMPTL
IMTHNKSLAA QLYSEFKGFF PKNHVEYFIS YYDYYQPEAY IPRQDLFIEK DSSINEELER
LRLSATANLL EFDDVVVVAS VSANYGLGNP AEYKGMVLLL SLGMSLNQKE LLLKLVDMGY
KRNDAYFDRG DFRVNGDVVD IYPAYFNDEA IRLEFFGDEL DAMYHFDVLE NKRTKDVSKF
ILYATSQFIV GENRLKQAIK DIELELEDRL AFYEKENRLV EYQRLKQRVE FDLEMLSSTG
STKGVENYAR YLTGQKAGET PYSLFDYFEV SGKDYLVIVD ESHVSLPQFR GMYAGDRSRK
EVLVEYGFRL PSALDNRPLK LDEFIAKKAN YLFVSATPNQ YEIDLSQGHV YEQILRPTGL
LDPRIEVISS DNQVEVLFDR AKAVIARGER VLVTTLTKKM SEELTRYYQE LGIKVKYMHS
DIDAVERNEL IRGLRKGEFD MLVGINLLRE GLDLPEVSLV AVLDADKEGF LRSRTSLIQT
MGRAARNVNG TVILFANKIT NSMKEAIDTT EARRKYQGDY NKKYGITPRS ASRNLEDSLK
EEDLPNLYNK AKKLEKMPAS ERAKIVKELR KQMLEAAKNL EFEKAAALRD EIAKLREL
|
|---|
| |