Gene CFF8240_0316 details

Gene Information

• Locus tag: CFF8240_0316
• Symbol: clpX
• ID: 4538067
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter fetus subsp. fetus 82-40
• Kingdom: Bacteria
• Replicon accession: NC_008599
• Strand: +
• Start bp: 284125
• End bp: 285345
• Gene Length: 1221 bp
• Protein Length: 406 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 639745711
• Product: ATP-dependent protease ATP-binding subunit ClpX
• Protein accession: YP_891518
• Protein GI: 118474538
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1219] ATP-dependent protease Clp, ATPase subunit
• TIGRFAM ID: [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX)

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTAGGA AATGTAGTTT TTGCGGTGAG AGTGAAGCCG AAGATAGAAA ATTACTAGCA 
AATGAAACAG ATAGCGCTTT TATATGCGAG TACTGCATTG ATGCTGGATA TGCTGCTGTG 
CATGGTGATG AAAGTTTAAA TAGTAGTGAA AAAACAAGTA AAGATTATAA AGATATAACA 
CCAAAACTTT TAAAAGATGT TTTAGATAGT TATGTTATAG GTCAAGAAAA AGCTAAAAAA 
GTATTTAGCG TAGGCGTTTA TAACCATTAT AAAAGGATAT TTAAACAAGA TGCTATAGAA 
GATGATACTG AAATTTCAAA ATCAAATATC TTGCTTATAG GTCCAACAGG AAGCGGTAAA 
ACTCTTATGG CGCAAACTTT AGCTAGATTT TTAGATGTGC CGATCGCGAT TTGTGATGCT 
ACGAGCTTAA CTGAGGCAGG ATATGTAGGC GAAGATGTGG AAAATATCCT TACAAAACTA 
CTTAGCGCAG CTGGCGGAGA CGTACAAAGA GCTCAGCAAG GAGTTGTATT TGTCGATGAG 
ATAGATAAAA TAGCAAGAAT GGGTGAAAAT CGCTCTATAA CTCGCGATGT AAGCGGCGAA 
GGAGTTCAGC AAGCACTTCT TAAAATAATA GAAGGAAGTA CCGTAAATAT CCCTCCAAAA 
GGCGGTAGAA AGCATCCAAA TCAAGATTTT ATTCAGATAG ATACAACAAA TATTCTTTTT 
GTATGCGGCG GAGCTTTTGA TGGGTTAAAT GAGATTATAG AAAGAAGAAT AGGAAAAAAT 
GTTCTTGGAT TTGGTCAGAT AAAACGCGGT CGCGACGATA AGCAAAATTT AATAAGCTTA 
GTTGAGCCAG ATGATTTAGT TCATTTTGGC CTTATCCCTG AGCTTATAGG ACGTTTGCAT 
GCTATTGCTA CTTTAAATGA GATAACAACC GATGATATGG TAAAAATTTT AACGGAACCA 
AAAAATGCTC TTTTAAAACA GTATCAGAAA TTATTTGCGA TAGATGGCGC AAATTTAAAA 
TTTGATAATG ATGCTATAAA AGAGGTTGCT ACACAAGCTA TAAATCGTAA AACAGGAGCA 
AGAGGTCTTA GAAGTATCAT GGAAGATATT ATGATGGACA TAATGTTTAA TCTTCCAGAT 
CTTAAAGGAT ATGATGTTAT CATCTCAAAA GACGTTGCCA TAGGCAAGGC AAAACCATTA 
TTAATCAAAG CACAAAACTA A 

 

Protein sequence

MARKCSFCGE SEAEDRKLLA NETDSAFICE YCIDAGYAAV HGDESLNSSE KTSKDYKDIT 
PKLLKDVLDS YVIGQEKAKK VFSVGVYNHY KRIFKQDAIE DDTEISKSNI LLIGPTGSGK 
TLMAQTLARF LDVPIAICDA TSLTEAGYVG EDVENILTKL LSAAGGDVQR AQQGVVFVDE 
IDKIARMGEN RSITRDVSGE GVQQALLKII EGSTVNIPPK GGRKHPNQDF IQIDTTNILF 
VCGGAFDGLN EIIERRIGKN VLGFGQIKRG RDDKQNLISL VEPDDLVHFG LIPELIGRLH 
AIATLNEITT DDMVKILTEP KNALLKQYQK LFAIDGANLK FDNDAIKEVA TQAINRKTGA 
RGLRSIMEDI MMDIMFNLPD LKGYDVIISK DVAIGKAKPL LIKAQN