Gene CFF8240_0034 details

Gene Information

• Locus tag: CFF8240_0034
• Symbol: rplC
• ID: 4538119
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter fetus subsp. fetus 82-40
• Kingdom: Bacteria
• Replicon accession: NC_008599
• Strand: +
• Start bp: 33879
• End bp: 34457
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 639745432
• Product: 50S ribosomal protein L3
• Protein accession: YP_891244
• Protein GI: 118474609
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0087] Ribosomal protein L3
• TIGRFAM ID: [TIGR03625] 50S ribosomal protein L3, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.0000482612
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAATATA TTGTAGAAAA AATAGGCATG AGTAGAACTG TTTCAGCTCC TAGTACTCCT 
GTAACTCTGC TTAGGCTAGT TCCTGCTAAA GTTTGCGAGC TAGGCGAAGG CGGTAAAGCT 
ATAGTGGCTT ATGCGCATAC AAAAGCAGAT AACAAAGCCA TAAAAGGTCA GCAAAAAAAA 
TATGGTTTGA GTAGTGAATT TAATTCATTT GCTACTTTAA GCGTTGCAAA TAGCGAAGCT 
GGCGATTTGG ACGTAAATCC ACTAAATGAA GCAAAAGTTT TAAAAGTAAG TTTTAATACT 
AAAGGTAGAG GCTTCCAGGG CGTTATAAAA AGACACGGAT TCTCAGGCGG TCCAGCAAGT 
CACGGCTCAC GTTTTCACAG ACGTCCGGGA TCTATAGGAA ACTGCGAATG GCCAGGTCGT 
GTTCAGCCAG GTAGAAAAAT GGCAGGGCAT TACGGCAATG AGAAAACTAC AGTTAAAAAT 
GAAGTAGTGA GCTTTGATAG TGCTAATGGA ATTTTGGTTT TAAAAGGTTC AGTACCAGGA 
TTTAACGGTG CTATGGGTAG AGTAAGGATA GTCAAATGA 

 

Protein sequence

MEYIVEKIGM SRTVSAPSTP VTLLRLVPAK VCELGEGGKA IVAYAHTKAD NKAIKGQQKK 
YGLSSEFNSF ATLSVANSEA GDLDVNPLNE AKVLKVSFNT KGRGFQGVIK RHGFSGGPAS 
HGSRFHRRPG SIGNCEWPGR VQPGRKMAGH YGNEKTTVKN EVVSFDSANG ILVLKGSVPG 
FNGAMGRVRI VK