Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_2067 |
Symbol | |
ID | 5407028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | + |
Start bp | 1961930 |
End bp | 1962955 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640873452 |
Product | TPR repeat-containing protein |
Protein accession | YP_001409226 |
Protein GI | 154174836 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.885223 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATATAT TTTTTATAGA GCATCGAGAC CCGATATTTA GCCTCATCGT GCTTTTTAGC ATCGTTTTGA TGATAGCCGC CCTTAGCTAT GCGTGGGGCA TATTTTCCAG CAAAGACGAG AAAAAAAAGA TCGAGAAATT TATCAAAAAA TTTGACAGTC AAAGTGCTAT CAGCGAGCAG CATAAGCAAA TTCTGCTAAG CCCCGAGGTC GATAGTCAAA GCCTGAGTGT GCTTGGTATG ACCTTTGCTA AAAACGGCGA CTTTGAAAAG GCGATCAGCG TCTATCTCAT CGCACTTTCA AAGGTCAAGG ACAAAAATGA GAAAGAATTC ATCCTAAACG AGCTTGGCGA GGTTTATTTT AAGGCCGGCT TTTTGAAGCG TGCGGACGAT ATATTTTTAG AGGCGCTGAA GCTCTCGCCG CGAAATGCGG TCGCTCTTCG CTTTTTAACG ATGATAGACG AGAAGCTAAA AAACTATGAC GAGGCACTTT ATGCGCTAAA TTCCCTAGAA GAGCTGGGTG TAAGCGTTCG CGCTCAAAAG GCCTATATAA AGGCCATAGC GATCCTTGAC GATAAGAATT TGGACACGAA GCAAAAGAGC GATAAAATTT TAGCTTTAAG TAGCGACTTT GCGCTTTTAA AACGCATGGC GATGCAGATC CTCATAAAAA ACGGGCTAAA TTTAAGCGAA TTTAAAAATT TCCCGCCTTT AGACGAAGTC ATAGACCTCA TCTATCTGCA AACCAAGCCC GTAAATTTAA GCGACGACGA GTATAGGGCA CTATTTTACG CGAAGGGCTT GATCGATGAG AAGTGCGATA TAAAGGGCTT TGAGCTAAAT GTCATAAAGC ATCTGAACGA CGCTGGCTAC AAAGGTGCGA CACTAAGCTT CAACTACGTT TGTAAAAGCT GTAAAAACTC CTTTCCTATG CACTTTTATC GCTGTCCGAT GTGCCACGAG CTAGGAAGTA TCAAAATTTT GCCTCATATC ACGCAAGCAG ATGATGAAAA CGGTAACACT TTTTAG
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Protein sequence | MDIFFIEHRD PIFSLIVLFS IVLMIAALSY AWGIFSSKDE KKKIEKFIKK FDSQSAISEQ HKQILLSPEV DSQSLSVLGM TFAKNGDFEK AISVYLIALS KVKDKNEKEF ILNELGEVYF KAGFLKRADD IFLEALKLSP RNAVALRFLT MIDEKLKNYD EALYALNSLE ELGVSVRAQK AYIKAIAILD DKNLDTKQKS DKILALSSDF ALLKRMAMQI LIKNGLNLSE FKNFPPLDEV IDLIYLQTKP VNLSDDEYRA LFYAKGLIDE KCDIKGFELN VIKHLNDAGY KGATLSFNYV CKSCKNSFPM HFYRCPMCHE LGSIKILPHI TQADDENGNT F
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