| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_1955 |
|---|
| Symbol | ybbB |
|---|
| ID | 5407525 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter curvus 525.92 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009715 |
|---|
| Strand | - |
|---|
| Start bp | 1092229 |
|---|
| End bp | 1093239 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640872529 |
|---|
| Product | tRNA 2-selenouridine synthase |
|---|
| Protein accession | YP_001408347 |
|---|
| Protein GI | 154174564 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2603] Predicted ATPase |
|---|
| TIGRFAM ID | [TIGR03167] tRNA 2-selenouridine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.190021 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCGTTAG TTGAGCTTGG CGTCAAGGCA TGGCTAGAGC AGCGGGATAA ATTTGAAATT
CTAATCGACG CCAGATCTCC CGGTGAATTT TGCTACTCAC ACATAAAAAA CGCCAGAAAT
TTATACGCTC TAAACGACGA GCAATACAAA CAAACCGGCA CCATCTATAA ACAAAACAGG
CAGCTGGCGA AAGTAACTGG CGCTAAATAC GTCTGCTCAA ACCTGCAAAA CGTCATCGAC
GAGGTTTATA GCGCGTGTAA GGTAGGCTCG CTGGTAGGCA TCTACTGCGC TAAAGGCGGC
ATGAGGTCTT TATCGCTTGG CTCGGTGCTT AGTATGATAG GATACCGCGT GGTGCGCCTT
GAAGGTGGAT ACAAGAGCTT TCGCGCTCAT GTTTTAAACG AGCTTGCTGC GCCCTTGCAG
ACGAAATTTA TCACGCTTTT TGGAAATACG GGAAGCTATA AAACAAAGCT CATCAGGGCG
CTTGAGCCGT CTATCGACCT TGAAGCGATG GCAAATCATC TAGGCTCGGT ATTTGGCGCT
ATAAACGGTG CTCAACCAAG CCAAAAACAC TTTGAGGACG AGCTTTTCGA GCAGCTTAGC
GGGCTTAAAA ACGAAGTTTG CTTCATCGAA GGCGAAAGTC GTAAGATAGG CTCGCTAAAT
TTACCCGCCA GCCTTTATGA GGCTATGCGA GGTGGCGTTT GCGTGGAGGT AAAAGCTAGC
CTAAACAAGC GCATAGAGTG TATAATGAGC GACTACAAAG GCGTTAAAAG CGAGTTTTTC
TATGAGTGTA TGGATAAAAT TTCGCCATTT ATCTCACGCG AGGCCAAGAG CGAGGCGATA
AGCGCTTACG AGCTTGGCGA TATGGCAAAG GTGAGTGAAA TTTTGCTCGT CAAATACTAC
GACAAGGTCT ATAAGAAAAA TCAAAAGATC GATATCACGA TAAATTCCGA TGATTTTGAC
GAGGCTTTAG CAAGACTAAG GCAGATACGA GAGAGTATCA AGCCTTTTTA G
|
|---|
| Protein sequence | MPLVELGVKA WLEQRDKFEI LIDARSPGEF CYSHIKNARN LYALNDEQYK QTGTIYKQNR
QLAKVTGAKY VCSNLQNVID EVYSACKVGS LVGIYCAKGG MRSLSLGSVL SMIGYRVVRL
EGGYKSFRAH VLNELAAPLQ TKFITLFGNT GSYKTKLIRA LEPSIDLEAM ANHLGSVFGA
INGAQPSQKH FEDELFEQLS GLKNEVCFIE GESRKIGSLN LPASLYEAMR GGVCVEVKAS
LNKRIECIMS DYKGVKSEFF YECMDKISPF ISREAKSEAI SAYELGDMAK VSEILLVKYY
DKVYKKNQKI DITINSDDFD EALARLRQIR ESIKPF
|
|---|
| |