Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_1242 |
Symbol | |
ID | 5406376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | - |
Start bp | 400543 |
End bp | 401394 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640871844 |
Product | protein TonB |
Protein accession | YP_001407679 |
Protein GI | 154174006 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.510655 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCTATCTC AACACTCACT GAATAAAGTT TCAAATTACA GCGGGCTGTT TGCGTCTATT TTACTGCACG TAGCCGCTTT GATATTTATT TTGCACCATC CGTTTGAGGA GATAAAGCCT GCGGAGAACA AATCCATAAA AATGGCGCTT GAGTCATTTG ATATGCCTCA GGCCAAAGCC GAGGTCTCGA CGGCACCAGA AATCGCCGAA ACGCTCATGA TACCAGAGCC TACTCCACCG GCCCCACCTC CTCCGCCACC ACCGGAAGTA AAACCGCCCG AGCCTAAGCC TATCCCTCCG GAGCCAAAGC CTGAGCCTAA ACCAAAACCA GAACCCAAAA AAGAGCCAAA ACCCGAGCCT AAACCTAAAC CAAAGCCAAA GCCCGAGCCT AAGAAACAAG AAGAAGTAGC TCAGCCACAG CCGACCCCGC CGGTTCAAGC GCCTCAGCCG ACTCAACCGG CAACTACGAC GCAGACGTCA AGTGCTTCTT CATCTATGCA CAACCTACCG CCAAACGGCG CAAATAGAGC GGCAGCTCCC GTTTCCAAGA TAGGCGAGCT AAATTTGGCA AATTCTGCAG GAGATGAGAA TTTCGCCAAG ATAGTAAATG CCATCAAAAA GCATCAAAAA TACCCTAAAA ATGCTCAAAA GATGCGTCAT CAAGGGGTCG TAGAGGTTAG ATTTTTACTA AAACAAAATG GCTCTGTCGA GGACATCAAA GTCATAAAAA GCTCGGGCTA CTCGAGCCTT GATGACGGAG CGATCGAAAA CGTAGAGCGC GCGAGCCAAG ACTTCCCGAC TCTAAACAAC AGCTACTACG TAAGCATACC TATATCGTTT AAGCTTAGAT GA
|
Protein sequence | MLSQHSLNKV SNYSGLFASI LLHVAALIFI LHHPFEEIKP AENKSIKMAL ESFDMPQAKA EVSTAPEIAE TLMIPEPTPP APPPPPPPEV KPPEPKPIPP EPKPEPKPKP EPKKEPKPEP KPKPKPKPEP KKQEEVAQPQ PTPPVQAPQP TQPATTTQTS SASSSMHNLP PNGANRAAAP VSKIGELNLA NSAGDENFAK IVNAIKKHQK YPKNAQKMRH QGVVEVRFLL KQNGSVEDIK VIKSSGYSSL DDGAIENVER ASQDFPTLNN SYYVSIPISF KLR
|
| |