Gene CCV52592_0827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCCV52592_0827 
Symbol 
ID5407294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter curvus 525.92 
KingdomBacteria 
Replicon accessionNC_009715 
Strand+ 
Start bp206805 
End bp207458 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content41% 
IMG OID640871666 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_001407502 
Protein GI154173682 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.027438 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAGTTTT TATATGACGC TATGGCCGGC TGCGAAAATT TAAAGATCAT AAACGAAGCC 
TTTTTGCATC TAAAGGCACG CAGAGCGAAG GTCGGCGAGC GCGTAAATTT AAGAAATTTG 
AAAGACGGCA AGGACTATCT TTACGAGATA GAGGAATTTG GGCGCAAAGA TGCTAGACTG 
AGGCTTGTTT TTACATCGAC TCTTACAGTG AGAGACTATA AATTTAGCCT CGCTTGGGCG 
GTCGTGGATC CAAAAACTAT CGAAAAGACG ATCCCTTTTT TAAACGAGCT TGGCGTTGGC 
AAACTCATCT TTGTTTATAC GAAATTTTCG CAGGCGAATT TTAAAATAGA CGTGAAGCGC 
CTCGAATATA TAAGCGCGCT TTCTTGCGAG CAGTGCGGAC GCGACTCGCT GATGAGCTTT 
GAGATTTATA AAAATTTAGA CGAATTTTTA GCCGTTTATA AAGATGTTGC ACTCGTAAAT 
TTTGGCGGTA AAAATTTAAC CGAATATAAA GGAGAGCTGC TTTTTATCGG TCCTGAGGGA 
GGCTTTGCTT TAGAAGAGAC GCGTAAGATA AATTCTAGCT ACTCACTTGA TACGAATAGT 
ATTTTAAGGT CGCAAACCGC GGCTGTTAGT GTGGCTAGTA AATTTTTAGT GTAG
 
Protein sequence
MQFLYDAMAG CENLKIINEA FLHLKARRAK VGERVNLRNL KDGKDYLYEI EEFGRKDARL 
RLVFTSTLTV RDYKFSLAWA VVDPKTIEKT IPFLNELGVG KLIFVYTKFS QANFKIDVKR 
LEYISALSCE QCGRDSLMSF EIYKNLDEFL AVYKDVALVN FGGKNLTEYK GELLFIGPEG 
GFALEETRKI NSSYSLDTNS ILRSQTAAVS VASKFLV