| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_0607 |
|---|
| Symbol | |
|---|
| ID | 5407272 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter curvus 525.92 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009715 |
|---|
| Strand | + |
|---|
| Start bp | 1766887 |
|---|
| End bp | 1769007 |
|---|
| Gene Length | 2121 bp |
|---|
| Protein Length | 706 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640873219 |
|---|
| Product | TonB-dependent siderophore receptor |
|---|
| Protein accession | YP_001409009 |
|---|
| Protein GI | 154174827 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAA TAAACATAAG TTTAGCAGCT TCGGTGTTAC TTTTGACGCA AATTTACGCC
GCAGACGTGA AACTTGAAGG CGTGGAGGTC ACGGAGAGTG CGGATGATGG CTACCGCGCG
AAGACGAGCG AGGTCGGAAA GACGACGACG CCTATTTTAG AGATCCCACA AACTGTCAAT
GTCGTGACCC AGCAACAGTT AAAGGACAAA AAGCCTGAGA CGCTGGCAGA AAGCCTACAA
AACGTGAGTG GTATCAGCTA CGGAAACACC ACGGGCGGCA TATTTGACGC GATCATAAAG
CGCGGCTTTG GTGGCGGTAG AGACGGCTCG ATCATGCGAA ACGGCGTGCC AGCGACCGTG
ATGCACAGCT TTAATAAAAG CGTCGAAAGC GTGGAAGTGC TAAAAGGACC AGCGAGCCTA
CTTTACGGCG CGCAAGAGCC GGGTGGTATC ATAAATATGG TAACTAAAAA GCCAAAATAT
GAATTCGCAA ATGAAATTTG GGCAGGCGTG GGCAACCGCA ACTACTGGAA CGCGGGCTTT
GACACGACAG GGCCGATCGG CGAGAGCGGC TTTGCGTATA GATTTATATT TGACGCGATG
CAAAAGGACT ACTGGCGCGA ATTTGGCGAT TATAAAAACT ATCTATTCGC CCCGTCGCTC
TCGTATAAAG GCGATGACTA CCGCATAAAT TTCGCCTACA CGCACACGCG TTCGACTGAC
CCGATCGACC GCGGTATGTA TCTCATCCCA GCCACTGGGC AGCTGTTGCC GATCGGCAAA
AAGGTGCGCC TTGACGAGCC GTTTAATAAG CTAAAAACAA CTCTCGACAC CGTCGATGTA
AATTTTGAGA AAAATATCGG CGAGGACTGG CTTTTGCGCG GTGCTTACGC CTTCTCACGC
ACAAAGCACG AATACGGACA CATCCGATTA ATGAATGTAA ATTTAACCAC GGGCATCGCG
ACTAGGCGTA ACGAATACTA CGACGGCTTC ATCCACCGCA CGCACGCGGG CAGCTTAAAT
TTAAACGGCT ATGTTAAAAC CGGCGAAATC GAGCACAATT TATTATTTGG GCTTGACGCG
AAGGAATACT ACCGCTACCG ACCGGGCGGC TTACAAGCCA CGGGCAGGCA GTTTGATATT
AATATCTTTC ACCCGATCTA TGGCAGAGTG GGCTTGCCAA CAGCCAGACA ATCAAGCATC
CAATATCAAA AGCTAAAAAC GATCGGTGCT TACGCGCAAG ATAGTATAAA TTTGACCGAA
AATCTCATCT ACTCTATCGG ACTAAGATAC GAATACTACG ACCAGCTCGC GCGCGGAACG
ACCACAGGCA AGCCAACGAC CGATCAAAAA GACGGCAAAT TTACGTGGCA GACTGGGCTT
TTATACCTGC TCACGCCTGA GTGGTCGATC TACACGAACT ACGCGCAAAG CTTCCAGCCG
CAAATGGCTA TCAGTGGCGA TGACATCGGC GACATAAAAC CAGAAGAGGG CAAGAGTATC
GAGTTTGGAA CGAAATTTCA AAACGATAAC ATAACAGCGA GTGCAGCGAT CTACAACATC
GACAAGAAAA ACATCATGCG CACCGTAAAT AGCGTCTCTA CGCCAGTTGG CAAGGCTCGC
TCCAAAGGCT TTGAATTTGA CTTCAACGGA CGCGTCACGC AAGGGCTAAC TCTTGGCGCA
AGCTACGCCT ACACAAAGAC CGAAGTCAGG CAGGATAGCG GCGCATTTGC CGTGCTAGTG
GGCAAACCGC TCGAAGCCAC GCCAAAGCAT CAAGCAAGCC TTTTTGCGAA CTATGATTTT
AGTCACCTTG GCGTAAAGGG GCTTAGAGTG GGCGGCGGAG CGCGATATTT TGGCTCGTGG
TACACCTACT ACATGCGCAC AAATTTAGCC AATGTGCCAG CAGGAACAGC GTTTAAGATG
CCTGACGCGG TCGTTTATGA CGCATTTATC AGCTACGACA CAAAAATCGC TGGCTTAGAG
ACAAATTTCG CATTTAACGT CAAAAACCTG ACCGACAAGC TTTACTACAC ATCATCATCA
ACTGGCACGA CGGCAAACAT CATCCCGATC CAGCCAGGAT ACGCACGCCA GTTTATGCTG
ACGGCAACGG TGAAATTTTA A
|
|---|
| Protein sequence | MNKINISLAA SVLLLTQIYA ADVKLEGVEV TESADDGYRA KTSEVGKTTT PILEIPQTVN
VVTQQQLKDK KPETLAESLQ NVSGISYGNT TGGIFDAIIK RGFGGGRDGS IMRNGVPATV
MHSFNKSVES VEVLKGPASL LYGAQEPGGI INMVTKKPKY EFANEIWAGV GNRNYWNAGF
DTTGPIGESG FAYRFIFDAM QKDYWREFGD YKNYLFAPSL SYKGDDYRIN FAYTHTRSTD
PIDRGMYLIP ATGQLLPIGK KVRLDEPFNK LKTTLDTVDV NFEKNIGEDW LLRGAYAFSR
TKHEYGHIRL MNVNLTTGIA TRRNEYYDGF IHRTHAGSLN LNGYVKTGEI EHNLLFGLDA
KEYYRYRPGG LQATGRQFDI NIFHPIYGRV GLPTARQSSI QYQKLKTIGA YAQDSINLTE
NLIYSIGLRY EYYDQLARGT TTGKPTTDQK DGKFTWQTGL LYLLTPEWSI YTNYAQSFQP
QMAISGDDIG DIKPEEGKSI EFGTKFQNDN ITASAAIYNI DKKNIMRTVN SVSTPVGKAR
SKGFEFDFNG RVTQGLTLGA SYAYTKTEVR QDSGAFAVLV GKPLEATPKH QASLFANYDF
SHLGVKGLRV GGGARYFGSW YTYYMRTNLA NVPAGTAFKM PDAVVYDAFI SYDTKIAGLE
TNFAFNVKNL TDKLYYTSSS TGTTANIIPI QPGYARQFML TATVKF
|
|---|
| |