| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_0527 |
|---|
| Symbol | |
|---|
| ID | 5405871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter curvus 525.92 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009715 |
|---|
| Strand | - |
|---|
| Start bp | 571742 |
|---|
| End bp | 572905 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640872012 |
|---|
| Product | MDR-like permease |
|---|
| Protein accession | YP_001407845 |
|---|
| Protein GI | 154173887 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCAA ATCGCAAACT ACTCGTTTTG ATCAGTATCG CAGGCATCAT CTCGGCTGCG
GACAACTGGA TCGCGTCATT ACTGCTGCCT AGCATCGCCG ATACGTTTGA GACCTCCGTG
ACCTCAGCCG CCGCAGTTTT GAGCGCGTAT CTGCTACCAT ACGGCTTGTT GCAGCCCGTT
TATGGATATT GCAGCGATCG ATACGGTAGG AAAAAGATCT TAGTCTCGCT CATGTTTTTC
CTAGCCCTAT TCACGCTTTT TTGCTCGCTT TCAAAAAGTC TGTCCGCGCT AATCATTTTT
CGCTTTTTCA CAGGTTGCGC CGCAGCCGGC GTGATAGCCG TTTCTTTGGG GATCTTAGGC
GATGAATACA GCGAACAAGA CAGGCAAAAA TTCGTAGGGA TTTTTCTAGG ATCGGTGTTT
TTAGGACAAG GGCTAAGTGC AGGCCTGGGC GGCTGGATAG TCTCTAGCTG GTCTTGGCGG
GCTAGCTTTT TGATATTTTG CATTTTGTCC GCCGCCTCGT TCATCTCGCT CTTTGCGCTA
GATGTCAAAA ACGAACAAAC GGGCAAAAAA GATGAAATTT CGTTCATGCA GTCGCTAAAA
TTTATCCTCA AGGATAAAAG CCTTTTGAAA GTGTATCTTT TGGCTTTTTG TAACGGTATC
GTCGTGCTTG GAGCGTATTC TTTCGTGGGA GCGTATCTGC TAAAAAAGCT AAACACGGAA
AACAGCGCGG CGGGAGTGTG CCTGATGCTT TACGGCATAG CTTGCTTCTT TGCGGGCAAT
GCAAATAGGT TTTTAAAAAA TTTCATTTCG CCGGATAAAA ATTTGATTTT GGGATTTCTC
GCCTCGTTTT TAGCCTTATG CTTTTTGGGG AGCTACTTCG TTTTTGCGGC TTTTGCGGGG
ACATTTTTGC TGGGTCTTGG ATATGTTTTG GTTCAGTCCG TGTTAGCCAG CGAGGCGCTA
CGTCCGAAAT TTGGCAAAGG GCTCTCCTCT GGTATCATCG GGGTGGCGAT ATTTTTTGGC
GGAGGTGTCG GCACCGCCGT GGGAGGCGAA ATTTTGCGGC ATTTTGACTA CCGCGTTTTG
TTTTTATCGT TTGCCGTTTT CCTAGCAGTT TTGCTCGTTT TTTACTGCGC GGATTTGGCA
AAAGCGCGCA AGATAAAGCT CTAA
|
|---|
| Protein sequence | MSSNRKLLVL ISIAGIISAA DNWIASLLLP SIADTFETSV TSAAAVLSAY LLPYGLLQPV
YGYCSDRYGR KKILVSLMFF LALFTLFCSL SKSLSALIIF RFFTGCAAAG VIAVSLGILG
DEYSEQDRQK FVGIFLGSVF LGQGLSAGLG GWIVSSWSWR ASFLIFCILS AASFISLFAL
DVKNEQTGKK DEISFMQSLK FILKDKSLLK VYLLAFCNGI VVLGAYSFVG AYLLKKLNTE
NSAAGVCLML YGIACFFAGN ANRFLKNFIS PDKNLILGFL ASFLALCFLG SYFVFAAFAG
TFLLGLGYVL VQSVLASEAL RPKFGKGLSS GIIGVAIFFG GGVGTAVGGE ILRHFDYRVL
FLSFAVFLAV LLVFYCADLA KARKIKL
|
|---|
| |