Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_0221 |
Symbol | |
ID | 5407704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | - |
Start bp | 1351610 |
End bp | 1352941 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640872807 |
Product | inner membrane protein YicO |
Protein accession | YP_001408605 |
Protein GI | 154173638 |
COG category | [R] General function prediction only |
COG ID | [COG2252] Permeases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATAAAGG GGGCTTTTGT GGATATTTTT TCTTTAGCGC AGAACAAAAC CAGCGTAAAG CAAGAATTTG GCGCCGGACT TACGACGTTT TTGGCGATGA TTTATATCGT GCCTACGAAC GCTTTCATAA TGAGCGAAAC CGGCATGCCT ATGGAGGCCT TGATCACCGC AACGGCCTTG ATCACGATAT TTTCGACCGT TTTAAACGGG CTTTGGGCGA ATACTCCGGT TGCGATGAGC GTGGGGATGG GGCTAAACGC TTATTTTACA TACGGGCTGT GTTTAGGCAT GAAAGTACCG TGGCAAACGG CGCTTGGCAT CGTTTTTTTG AGCGGAATTT TATTCATTGC GCTATCTTTC ACAAATTTTA GAATTTGGGT CATCAGATCT ATCCCTGTCG ATCTGCGCCG TGCTATCAGC GCAGGTATCG GCACTTTTAT AGCCTTCGTC GGGCTACAAA AAATGGGCAT AGTCGTAAAC AACGACGCGG TTTTGGTCGG ACTTGGAAAT TTAAAAGATA TGAACGTTTT GCTCGGTATC ATCGGGCTTA TATTAGTCAT TTCGTTTTGG GCGTGGAAGA TAAAAGGCGC GTTCATATTG TCCGTTTTGG CGACCTCGTT GATCGCTTGG ATATTTGGAA TTTCACCTTA TCCGAAGGAA TTTATCTCAC TGCCCGCATC TATCTCGCCT ATTTTTTTAG AGCTTGATAT AAAGAGCGTA TTTTACGATG CGATGGGAAA TTTCAGCCTA GCGCTCCTGC CTATCGTGGT CGTATTTTTT GTGACCGATC TGTTTGACTC GATAGGCACT CTATCAGCCG TGGGCATGAG AGCGGGGATC TTTAGCGAAA GTAAAAAAGA CGGCATCGTG AAGCTAGAAA AGACCCTGGA GGCGGACGCC GTAGCGACTG CAGCCGGAGC GCTCGTGGGC GTTAGCACGA CTACCTCGTT CGTCGAGAGC GCCAGCGGTG TGGAGGAGGG CGGACGGACC GGCCTTACCG CGGTAGTTTG CGGACTATTT TTCATCCTCA CGCTTTTCAT GCTGCCACTG TTTAAAGCTA TACCCGCAAA CGCCATATAT CCGATACTCG TGATGGTCGG TATTTTGATG TTTGCCGAGC TTGGCGAGAT AAATTTCAAA GACAGCGCCA CTGCGGTCGC GACATTTTTC ATGGTCGTGC TGATACCGCT TACATACTCG ATCACAAACG GGCTCGCGTT TGGTTTTATG GGGTATTTGA TAGTTAAAAT TTTAAAACGT GAATTTAGCG ATCTGAACAT CGGCATAGTC GTGCTGGCGC TCATTAGCTT TGTCGTATTT TTAGTGCATT AA
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Protein sequence | MIKGAFVDIF SLAQNKTSVK QEFGAGLTTF LAMIYIVPTN AFIMSETGMP MEALITATAL ITIFSTVLNG LWANTPVAMS VGMGLNAYFT YGLCLGMKVP WQTALGIVFL SGILFIALSF TNFRIWVIRS IPVDLRRAIS AGIGTFIAFV GLQKMGIVVN NDAVLVGLGN LKDMNVLLGI IGLILVISFW AWKIKGAFIL SVLATSLIAW IFGISPYPKE FISLPASISP IFLELDIKSV FYDAMGNFSL ALLPIVVVFF VTDLFDSIGT LSAVGMRAGI FSESKKDGIV KLEKTLEADA VATAAGALVG VSTTTSFVES ASGVEEGGRT GLTAVVCGLF FILTLFMLPL FKAIPANAIY PILVMVGILM FAELGEINFK DSATAVATFF MVVLIPLTYS ITNGLAFGFM GYLIVKILKR EFSDLNIGIV VLALISFVVF LVH
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