Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_2199 |
Symbol | |
ID | 5596512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | + |
Start bp | 1788482 |
End bp | 1789057 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640930327 |
Product | putative transport-associated |
Protein accession | YP_001467603 |
Protein GI | 157164965 |
COG category | [R] General function prediction only |
COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTCTA AATTTAGCGT TTTTGCATTT TTGGTCTTAT TTTTTTGCTC TTGCTCCTCA GTCCTCACCC CAGCAACAGC GCCGCTAAAT GTATATGACG CATACTCCAT CTCTCGCGAC AAGCGCGGCA TCTACTCGAT CTCGCGTGAT AAATTTATCC AAAGCAAGCT ACAAAGCAAA ATTTTGTTTT CAAAAGGACT TAGCAACATT GACATCGAGA TAGAGGTCTT TTATGGCGAT GCCTATCTAA TAGGGCTTGT TGATAGCAAA GAGCTTGAAG GTAAGCTAGT TGAGCTTGCC AAAAGCACGG ACGGCGTGCG AAAAATTTAC ACCTATCTTA GGGTAAAAAA GAGCGAGTAT CCCTGCGATA GCCTAAGCAT ACTTGCAAAT TTAAAGCAAA ATCTCTTTAA AGATAGCGTC GTTGAGGGCA CAAATGTGCG TGTTAGCATC GTTGGCTGTG ACGTTGTTTT TAGCGGTGTG GTAGATAGCA TCGAACAAGA AAAGCACGCC ATTTGGTATG CTAAGCACAT TGACGGCGTG GCTGATGTCT ATTCGTTTAT CAAAGTTATC AAATAA
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Protein sequence | MISKFSVFAF LVLFFCSCSS VLTPATAPLN VYDAYSISRD KRGIYSISRD KFIQSKLQSK ILFSKGLSNI DIEIEVFYGD AYLIGLVDSK ELEGKLVELA KSTDGVRKIY TYLRVKKSEY PCDSLSILAN LKQNLFKDSV VEGTNVRVSI VGCDVVFSGV VDSIEQEKHA IWYAKHIDGV ADVYSFIKVI K
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