| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1887 |
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| Symbol | |
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| ID | 5597196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | + |
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| Start bp | 2019059 |
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| End bp | 2021212 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640930558 |
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| Product | peptide ABC transporter, periplasmic peptide-binding protein |
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| Protein accession | YP_001467823 |
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| Protein GI | 157165115 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily |
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| TIGRFAM ID | [TIGR00649] conserved hypothetical protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.441469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACA AAAACGAAGA GAAAGTTGTA ACTAACCAAA GCAAAAACAA TAAAAGACGA
AGATTTAGAC CAAAAAATAA GCCAAAACAA GAGGGCGAAA CTACCGAGCA AACCTCACTA
GCAAGCAAAA GCGTGATAGA CAACTTCTTT GCAGCAGAGC AAGCTGAAAA TAAAGCGCAT
GCCGAGCCAA AGAGTCAAAA TCCTCGTCCA AAAAAGCAAA GAAATAACAA AAATCAAAAC
AAAACTGGCG AAAACAATAA GCCAAAAGAG CAAAAACAGC AAAAAGAAAA GCCAAAACAA
GAGCCAAAAG CTGAAGCTAA AAACGCGGCA AAAGAGCAAA AAGAGAAGCC AAAAAAGGCT
AAAAAACCAA AGAAAAATTT ACCTGCAAAG CTAAATGGCA ACGAGCAGTG GCAACAAGAT
ATCGCAAGTG CGATGGAGGC AAACAAAGCC ACTCACGAGC TAAGACTTGA GCCACTAAAA
TATCTAAACT CAAGCGAGCA TAAAATTCGT ATAACTCCGC TTGGCGGTCT TGGCGAGATC
GGCGGCAATA TGACGGTCTT TGAAACAGAA ACTAGCGCTA TAATCGTTGA TATCGGCATG
AGCTTTCCAA GCGAGAGCAT GCACGGCGTG GATATCCTCA TCCCAGACTT TGACTACGTT
CGCAAGATAA AAGATAAGAT AAAAGGCGTC ATCATCACTC ACGCACACGA GGATCACATC
GGCGCAGTGC CTTACTTTTA CAAAGAGTTT AAATTTCCTA TCTACGCCAC ACCTTTACCA
CTTGGCATGA TAAATAATAA ATTTGAAGAG CACGGACTAA AACAAGAGCG CTCACTCTTT
AGATCGGTCG AAAAGAGAAA ACCATATCTC ATAGGCGACT TTGAGGTCGA GTGGATACAC
ATTACGCACT CTATCATCGA TGCCTCAGCA CTTGCGATCA CGACAAAGGC TGGCACGATC
ATCCACACGG GCGACTTTAA AATCGACCAC ACACCGATAG ACGGCTACCC AACAGACCTT
GGCAGACTAG CGTATTACGG CGAGCGTGGC GTGCTCTGTC TATTAAGCGA TAGCACAAAC
AGCTACAAAG AGGGCTTTAC AAAGAGTGAA AGTAGCGTTG GCAAGACCTT TGACGCGATA
TTTTCAAAAG CAAAAGGCCG CGTCATAATG AGCACATTTA GCTCAAATAT CCACCGCGTC
TATCAAGCGA TCGAATGGGG GCTAAAATAC AACCGCAAAG TCTGTGTCAT CGGCAGATCA
ATGGAGCGAA ATTTATACAC TGCGATGGAG CTAGGCTACA TCAAGCTCGA TAAGAAAATT
TTTATCGATG CAAACGAGGT TGGTAAATTT AAAGATGATG AGGTGCTTAT CGTCACTACT
GGCAGCCAGG GCGAGACCAT GAGCGCGCTT TACCGCATGG CTACAGATGA GCACAAATAT
ATAAAGATAA AGCCGACCGA TCAGATAATC ATCAGCTCAA AAGCGATCCC AGGCAACGAA
AACAGCGTCT CAACGGTGCT AAATTTCTTA CTAAAATCAG GTGCGAGCGT CGCTTACCAA
GACTTTAGCG AGATCCACGT CAGCGGTCAC GCAGCACAAG AAGAGCAAAA GCTGATGCTT
CGCCTCATAA AACCAAAATT TTTCTTGCCG GTGCATGGCG AGTACAACCA CATCGCAAAG
CACAAAGAGA CGGCCATTAG CTGTGGTGTG GATGAGAGAA ATATCTATCT AATGAGCGAC
GGCGATCAGA TGGAGGTTTG TCAAAAGTAC CTAAAACGTG TAAAAACGGT AAAAACTGGC
AAAGTCTTCA TAGATAATCA AATAAATAAA CAAATCGCGG ACGACGTCGT CATCGACAGA
CAAAACCTTG CCGAAGCAGG GGTCGTTATG ATAATCGCTC AAATTTCACG TCACGGCGCA
AAACTCATCA ACAAGCCTCG CGTCATCAGC TACGGCCTTG TGGGCGATAA GCAAGACGCT
GAGTTTAGAA AAGAGATGGA AGGCGTGCTA GAGCAGTACC TAAGCAACGT CAAAGAGGAG
CTTTTAAAAG ATAGCAGACT ACTCGAGTCA CAAGTGCGTC AAGTTATCAG AAAGCACATA
TTTAGAAAGG TCAAAAAGTA CCCAACTATC GTGCCGATCA TCTATCTAAT GTAA
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| Protein sequence | MNDKNEEKVV TNQSKNNKRR RFRPKNKPKQ EGETTEQTSL ASKSVIDNFF AAEQAENKAH
AEPKSQNPRP KKQRNNKNQN KTGENNKPKE QKQQKEKPKQ EPKAEAKNAA KEQKEKPKKA
KKPKKNLPAK LNGNEQWQQD IASAMEANKA THELRLEPLK YLNSSEHKIR ITPLGGLGEI
GGNMTVFETE TSAIIVDIGM SFPSESMHGV DILIPDFDYV RKIKDKIKGV IITHAHEDHI
GAVPYFYKEF KFPIYATPLP LGMINNKFEE HGLKQERSLF RSVEKRKPYL IGDFEVEWIH
ITHSIIDASA LAITTKAGTI IHTGDFKIDH TPIDGYPTDL GRLAYYGERG VLCLLSDSTN
SYKEGFTKSE SSVGKTFDAI FSKAKGRVIM STFSSNIHRV YQAIEWGLKY NRKVCVIGRS
MERNLYTAME LGYIKLDKKI FIDANEVGKF KDDEVLIVTT GSQGETMSAL YRMATDEHKY
IKIKPTDQII ISSKAIPGNE NSVSTVLNFL LKSGASVAYQ DFSEIHVSGH AAQEEQKLML
RLIKPKFFLP VHGEYNHIAK HKETAISCGV DERNIYLMSD GDQMEVCQKY LKRVKTVKTG
KVFIDNQINK QIADDVVIDR QNLAEAGVVM IIAQISRHGA KLINKPRVIS YGLVGDKQDA
EFRKEMEGVL EQYLSNVKEE LLKDSRLLES QVRQVIRKHI FRKVKKYPTI VPIIYLM
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