Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_1655 |
Symbol | |
ID | 5597186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | + |
Start bp | 179001 |
End bp | 180635 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640928785 |
Product | ABC transporter ATP-binding protein YojI |
Protein accession | YP_001466101 |
Protein GI | 157164526 |
COG category | [P] Inorganic ion transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4615] ABC-type siderophore export system, fused ATPase and permease components |
TIGRFAM ID | [TIGR01194] cyclic peptide transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGTAA ATTTAATAAA AAGCAATCTT TTTTCAATAA TCAAAATAGT GATCCTGACG CTCGCCTTTA GCGGGCTTGG CGTCTGGACG CTCTCTTTTA TCAACAACGA ACTTGTAAAT TTAAAAGAAT TTGACGCCTT TGTGGCGGTT AAATTTATAG TTGTTTTGCT CCTCTTTTTT CTAAGCGCCA TCGCTGCAAA CATCTCACTT ACAAATTTCG GACATAAATT TATCTACGAG CTTAGATATC AAAGCGTAAA GCAAATTTTA GACACGCCAA ATAGCGTGAT AAACGAAATC GGCAAGGCAA AGATCATAGC AAGTCTAAAC AACGACATAA AAACGATCAC ATTTGCCTTT ATGAGCGCTA CTGGCTTCAT ACAAAGCCTA GTTTTCATCA TCTGCGCTAG CATCTATCTT TGCGTGATCG CGCCAAAAGT TTTTATATTT CTAGCCGTTT GGATCGGTGC GACGCTTTTT ATAAACACGT TTTTGATGAA AAAGATCCAC TTTTACTTTA AAGACTCAAG GACGCAAGAT GACGCGCTTC AAAGGCACTA TGATGACATC GTTGAGGGTC ATAGAGAGCT TAGTCTAAAC AGAGCAAGAG CGCAAATTTG CTTTGATGAG CTAAATTTGA CAGGCGACAA GAAGCGCCAA AGCATGGTAA AAGCTGACGT ATTTCACGCA CTAAGTGATA ATTTCACAAA CGTGATGCTC CTTGGCTCAG TCGGACTTTG TGTATTTTTA TGCGTGGCAT TTGACTGGGC AAGCCTGCAA ACAGCACTTA GTATAAGCCT TACGATACTA TTTTTAAGAG GCTCATTTAT GAGTATGGTT GGCTCCATAC CAGCCGCACT TAGCGCAAAG GTGAGCTTAG AAAAGATCAT GAGTTTAAAT TTAAATGAAT TTAAAGAAGG CTTTAAATTT GATGATAGCC TAAGCGATGA GTGGCAAAGC ATCAGGCTAA AGGGTGTAAA TTTCAACTAC GACCACGGCA AATTTAGCCT AAAAGATGTA AATTTAGAGA TCAAACGCGG TGAGATAACA TTTATCATCG GTAAAAATGG TAGCGGCAAA AGCACGCTTA TAAACATTCT TTGCGGACTT ATCCGCCCAA GCAGCGGCGA AATTTACCTT GATAGCACAA AGATAGATGA TGCAAATTTA CAAAGCTATC AAGCAAAGAT AAGCGCTATT TTTGCTGACT TTTATCTATT TTCGCAAACG CTATCTCGTG ATGGCTTTGC CAGCCAAAGC GATATAGAGG AGCTTTTAGC CCTGCTTGAG ATAGATAAAA AGGTAAGTGT CGTTGATAAT AAACTTAGCA CCACGCAGCT CTCAACTGGC CAGAGAAAGC GACTAAGCCT GCTAATAGCC ATATTAGAAC GCCGCTCTAT CCTTATCCTT GATGAGTGGG CGGCCGATCA AGATCCGTTA TTTAAGCGTA AATTTTATAA AGAAATTTTG CCATTTTTGC AAAGCAAAGG CATAAGCGTC ATCGCTGTAA GCCACGATGA TAGCTACTTT GACGTGGCAA CTAGGATCAT TTTAGTAAAA GATGGTTTTG TGCGTGAGCT TGATGAGGCT GAGCGCATAA GTGCTGCAAA AGACGCCGTG GAAAAGATAA AATAA
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Protein sequence | MLVNLIKSNL FSIIKIVILT LAFSGLGVWT LSFINNELVN LKEFDAFVAV KFIVVLLLFF LSAIAANISL TNFGHKFIYE LRYQSVKQIL DTPNSVINEI GKAKIIASLN NDIKTITFAF MSATGFIQSL VFIICASIYL CVIAPKVFIF LAVWIGATLF INTFLMKKIH FYFKDSRTQD DALQRHYDDI VEGHRELSLN RARAQICFDE LNLTGDKKRQ SMVKADVFHA LSDNFTNVML LGSVGLCVFL CVAFDWASLQ TALSISLTIL FLRGSFMSMV GSIPAALSAK VSLEKIMSLN LNEFKEGFKF DDSLSDEWQS IRLKGVNFNY DHGKFSLKDV NLEIKRGEIT FIIGKNGSGK STLINILCGL IRPSSGEIYL DSTKIDDANL QSYQAKISAI FADFYLFSQT LSRDGFASQS DIEELLALLE IDKKVSVVDN KLSTTQLSTG QRKRLSLLIA ILERRSILIL DEWAADQDPL FKRKFYKEIL PFLQSKGISV IAVSHDDSYF DVATRIILVK DGFVRELDEA ERISAAKDAV EKIK
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