| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1566 |
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| Symbol | ispH |
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| ID | 5596355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | + |
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| Start bp | 551828 |
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| End bp | 552652 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640929130 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_001466438 |
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| Protein GI | 157164476 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0863493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAAGATCG AGCTTGCTAG TAGTTATGGA TTTTGCTTTG GTGTAAAAAG GGCGATAAAG
ATAGCTGAAA ATGCTGGAGA TGCCGCAACT ATTGGCCCGC TCATCCATAA CAACGAAGAG
ATAAGCAGGC TAGAGAAAAA CTACAATGTA AAGACGCTTG AGGGCATAGA CGAGCTAAAA
GATGAGAAAA AGGCGATCAT CCGCACTCAT GGCATCACCA AGAACGACCT TGCAGAGCTA
AAAAAAACTG ATATAAAAGT GATCGATGCA ACTTGTCCAT TTGTGACAAA GCCACAACAA
ATTTGCGAAA AAATGAGCGA AGAGGGCTAT GATGTGGTGA TCTTTGGTGA CATGCACCAT
CCAGAGGTAA AAGGCGTGAA GTCATATGCC AAGGGCAATG TCTATGTTGT GCTTGAAGAG
AGCGAGCTAG AGGGCATTAA ATTTAAGCAA AAGGTCGCGC TCGTTAGCCA AACTACTAGA
AAAGTTGAGA AATTTATGCA GATCGCAAAC TACCTCATGC TTCATGTAAA AGAGCTGCGC
GTTTTTAACA CGATCTGCAA CGCGACATTT GAAAACCAAG AGGCTGCTAA AAATTTAGCA
AAAAGAGCTG ACGTGATGAT AATTATCGGC GGAAAAAACA GCTCGAACAC AAAACAACTC
TACCTAATAT CTAAAAATTT CTGCGAAGAT AGCTATCTCA TTGAAAGCGA AGAAGAGCTT
GAAAGATCAT GGTTTGATGG CAAAAATTTG TGTGGTATAA GTGCGGGTGC TAGCACACCT
GACTGGATCA TACAAAAAGT CGTTGACAGA ATCAAAAAAG TATAA
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| Protein sequence | MKIELASSYG FCFGVKRAIK IAENAGDAAT IGPLIHNNEE ISRLEKNYNV KTLEGIDELK
DEKKAIIRTH GITKNDLAEL KKTDIKVIDA TCPFVTKPQQ ICEKMSEEGY DVVIFGDMHH
PEVKGVKSYA KGNVYVVLEE SELEGIKFKQ KVALVSQTTR KVEKFMQIAN YLMLHVKELR
VFNTICNATF ENQEAAKNLA KRADVMIIIG GKNSSNTKQL YLISKNFCED SYLIESEEEL
ERSWFDGKNL CGISAGASTP DWIIQKVVDR IKKV
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