| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1484 |
|---|
| Symbol | |
|---|
| ID | 5597261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | + |
|---|
| Start bp | 704537 |
|---|
| End bp | 705829 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640929273 |
|---|
| Product | inner membrane protein YicO |
|---|
| Protein accession | YP_001466575 |
|---|
| Protein GI | 157163929 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2252] Permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAATTTT TTGACTTAGC ACAAAACAAA ACGAGTGTGA AGCAGGAATT TGGAGCGGGA
CTTACGACAT TTTTGGCGAT GATGTATATC GTGCCGGTAA ACGCGATCAT TATGAGCAAA
ACTGGCATGC CTTATGAGGC GCTAATAACG GCAACTGCGC TAATTACCAT ATTTTCTACG
ATATTAAATG GTCTTTGGGC GAACACACCA GTTGCGATGA GCGTTGGCAT GGGGCTTAAT
GCTTATTTTA CATTTGGTCT TTGCATCGGC ATGAAAGTGC CTTGGCAAAC GGCTCTTGGC
GTTGTTTTTC TAAGCGGCGT GATATTTGTC GTCTTGTCTT TTACAAATTT TAGAATGTGG
ATAATAAGGT CCATCCCACT TGACCTACGA AGAGCGATAA GCGCTGGCAT AGGCACATTT
ATCAGCTTTG TTGCGTTTCA GCAAATGGGC TTTATCGTAA ATAACGACGC GGTTTTGGTT
GGCATAGGAA ATTTCAGAGA TCCAAACGTG CTTCTTGGCG TTTTGGGGCT ATTTTTGGTT
ATTTGCTTTT GGGCATGGAA GATAAAGGGT GCGTTTATCC TAGCTGTGCT TGTTACTTCA
GTGATAGCTT GGGTGCTTGG CATCGCCCCT CATCCAACAG AAATTTTCTC AACTCCAGCC
TCTATCTCAC CGATATTTTT AGAGCTTGAT ATAAAAGGTG CCTTTAGCCT AGCCTTACTC
CCAGTTGTTA TCACATTTTT TGTGACCGAT CTTTTTGACT CGATAGGCAC GCTAGCTGGC
GTTGGCACAA GGGCTGGGAT ATTTGACGAA AACAAAAAAG ATGGCGTCGT AAAACTTGAA
AAAACTCTTG AAGCTGATGC TGTTGCTACT GCAGCTGGCT CGCTTGTAGG TGTAAGTACG
ACCACATCGT TTGTAGAGAG CGCAAGCGGC GTAGAAGAGG GCGGTAGGAC TGGTCTAACG
GCTGTATTTT GCGGACTTTT GTTTATACTT ACACTATTTA TGTTGCCACT TTTTAAAGCT
ATCCCTGGCA ATGCCATCTA TCCGATCCTC GTAATGGTCG GCGTACTTAT GTTTGCCGAG
CTTGCTAGCA TAAATTTTAA AGATCCAGCC ATTGGCGTTG CGACATTTTT CATAGTTGTG
CTCATCCCGC TTACCTACTC GATCACAAAT GGCCTTGCAT TTGGCTTTAT GTCATACGTC
ATAGTTAAAC TCATAAAGAG AGAATTTAGC GATATAAATT TAGGTGTAGT CGTGCTAGCG
CTCATTAGTT TTATCGTATT CTTAGTGCAT TGA
|
|---|
| Protein sequence | MKFFDLAQNK TSVKQEFGAG LTTFLAMMYI VPVNAIIMSK TGMPYEALIT ATALITIFST
ILNGLWANTP VAMSVGMGLN AYFTFGLCIG MKVPWQTALG VVFLSGVIFV VLSFTNFRMW
IIRSIPLDLR RAISAGIGTF ISFVAFQQMG FIVNNDAVLV GIGNFRDPNV LLGVLGLFLV
ICFWAWKIKG AFILAVLVTS VIAWVLGIAP HPTEIFSTPA SISPIFLELD IKGAFSLALL
PVVITFFVTD LFDSIGTLAG VGTRAGIFDE NKKDGVVKLE KTLEADAVAT AAGSLVGVST
TTSFVESASG VEEGGRTGLT AVFCGLLFIL TLFMLPLFKA IPGNAIYPIL VMVGVLMFAE
LASINFKDPA IGVATFFIVV LIPLTYSITN GLAFGFMSYV IVKLIKREFS DINLGVVVLA
LISFIVFLVH
|
|---|
| |