| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0677 |
|---|
| Symbol | |
|---|
| ID | 5595907 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 738699 |
|---|
| End bp | 739112 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640929304 |
|---|
| Product | lipoprotein ABC transporter permease |
|---|
| Protein accession | YP_001466600 |
|---|
| Protein GI | 157164685 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.319442 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA GAGCTTTTAC CCTAATAGAA ATCATATTTG TCATCGTCAT ACTTGGCGTC
TTGAGCGCTA TTGCTATACC AAAGCTTTTC TTTACTAGAA GCGACGCCAT AGTCGCAAAC
GCAAGAACAC AAATAGCCGC CATAAAAAGT GGCATCTCAC TAAAATACAA CGACAGCGTC
CTAAAAGGCA TTCCAAAGTA CCCTGATACG CTTGAGAGCC CAGGAAGTAA CCTTTTTCAA
AACGTTGTGA GCGTGCCTGT AAAAGACAGC GGCACAAAAA ACGGCTGGCA CAAAACTGGA
GCGACTACTT ATACCTTCAA ACTAGACGGA CAGATAGCAA ATTTCACTTA CAAAAACGCA
ACTGGCGAAT TTGACTGCAC AAGCAGCGAC GGACTTTGCA GCGCTCTTGA GTGA
|
|---|
| Protein sequence | MKKRAFTLIE IIFVIVILGV LSAIAIPKLF FTRSDAIVAN ARTQIAAIKS GISLKYNDSV
LKGIPKYPDT LESPGSNLFQ NVVSVPVKDS GTKNGWHKTG ATTYTFKLDG QIANFTYKNA
TGEFDCTSSD GLCSALE
|
|---|
| |