| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0589 |
|---|
| Symbol | |
|---|
| ID | 5595579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 1182038 |
|---|
| End bp | 1182697 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640929740 |
|---|
| Product | Sel1 repeat-containing protein |
|---|
| Protein accession | YP_001467022 |
|---|
| Protein GI | 157164196 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT ATCTACTACT TTTAACTGCT CTATTTTTCA CAGGCTGCTT AAACGTGATC
GGCATCGGAG AGACGCCAAA ACAAGATGAC TCATGGCAAC AGCCAAAGGA CGAAAAGGTG
GTGCAAAACA AAGAACAAAT TTCTAAAAAT GCTATCGATC TTTTAACACC AAAGTGCGAG
AGCGGCGATG CTGAAGCTTG CAATGACTTG GGTGTAAATT TCGAGCTTAT GAAAGAGTAT
GACAATGCCT ACGCAAACTA CAAAAAGGCT TGCGATGCGA AGGTGCAGCT TGCTTGCTCA
AACCTTGGCA CGCTCTATGA AAACGGCCTT GGCGTGAAAA AAGATCCAAA AAAAGCGGTC
GAAATTTACA AAGATAGCTG CAATAGCGGC GGTGTGCAAG CTTGCTACCA CCTAGGCAAC
GCCTACCGCA AGGGCGAGAT CGTAAAACAA GACTACTATC TAGCGATGGA GGCCTACACA
AACGCTTGCA ACGCTGGAGA TCTGCCAAGC TGCGCAAATA TCGGCGCGAT GTATGAGCTA
GGTCTTGGCA TGAACAAGGA CGAAAAGAGA GCTTATGGGA TTTACAAAGT CGCTTGCTTT
CGCGGTCTAA ACAAGGCGTG CCCACAGATG AAAAGACTAG GCGCAAAGCT TGGTATGTGA
|
|---|
| Protein sequence | MKKYLLLLTA LFFTGCLNVI GIGETPKQDD SWQQPKDEKV VQNKEQISKN AIDLLTPKCE
SGDAEACNDL GVNFELMKEY DNAYANYKKA CDAKVQLACS NLGTLYENGL GVKKDPKKAV
EIYKDSCNSG GVQACYHLGN AYRKGEIVKQ DYYLAMEAYT NACNAGDLPS CANIGAMYEL
GLGMNKDEKR AYGIYKVACF RGLNKACPQM KRLGAKLGM
|
|---|
| |