| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0425 |
|---|
| Symbol | |
|---|
| ID | 5597053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 1429674 |
|---|
| End bp | 1431692 |
|---|
| Gene Length | 2019 bp |
|---|
| Protein Length | 672 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640929990 |
|---|
| Product | fumarate reductase flavoprotein subunit |
|---|
| Protein accession | YP_001467269 |
|---|
| Protein GI | 157165747 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
|---|
| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGTAA AATATTATGA CGCATTGGTA ATTGGTGGCG GTCTAGCTGG TCTTAGAGCT
GCTGTGGCTG CTGGAGAAAA GGGCTTAAGC ACCGTAGTTT TGAGCCTCAT CCCTGTAAAA
CGCTCTCACT CTGCTGCTGC ACAAGGCGGC ATGCAAGCAA GCCTTGGTAA CTCTAAAATG
AGTGAAGGCG ATAACGAAGA TGTACACTTT GCTGATACAG TAAAAGGTAG CGACTGGGGT
TGCGATCAAC AAGTTGCACG TATGTTTTGT CAAACTGCTC CAAAAGCTAT TAGAGAGCTT
GCGGCTTGGG GCGTGCCTTG GACTAGGATC ACAAAAGGTG AAAGAAGCGC TATCATCAAC
GCTCAAAAGA CAACTATCGT TGAAAAAGAA GAGGTTCATG GCCTTATCCA CTCACGTGAC
TTTGGTGGTA CAAAAAAGTG GAGAACTTGC TACACAGCTG ACGCAACTGG TCACACCATG
CTTTTTGCTG TTGCAAACGA AGCGCTTAAG CACAATGTAG AAATTCACGA CCGCAAAGAG
GCGATCGCTT TGATACACCA AAATAACCGC TGTTACGGAG CGATCGTTCG CGACCTGGTA
AATGGCGAGA TCACAGCTTA TGTTTCAAAA GGCACACTTA TAGCAACTGG CGGTTATGGT
AGAGTTTATA AACACACTAC AAACGCTGTT GTTTGCGAAG GTATCGGCGC TGCGATCGCA
CTTGAGACTG GCGTAGCTCA GCTTGGCAAT ATGGAAGCTG TTCAGTTTCA CCCAACTCCG
ATCGTCCCAT CTGGCATTCT TTTAACAGAA GGTTGCCGCG GTGATGGAGG AATTTTACGT
GACGTTGATG GATACCGCTT TATGCCTGAT TATGAACCAG AGAAAAAAGA GCTAGCTAGC
CGTGACGTCG TTAGCCGCCG TATCATGGAG CACATCCGTG CAGGCAAAGG TGTGCCTAGC
CCTTATGGCT ATCACGTTTG GCTTGATATC TCTATCCTTG GACGCGAGCA CATCGAGAAA
AATTTACGTG ACGTTCAAGA AATTTGCGAA ATTTTTAACG GCATCGATCC TGCTGACACT
GAAGTATATA CTGACGAGAC AGGACATCAG CGTGGCAAAG GCTGGGCGCC GATCCTACCT
ATGCAGCACT ACTCAATGGG CGGCATCAAG ACAAAACCAA CTGGCGAGAG TCCAACACTA
GCTGGTCTAT TTAGCGCTGG CGAGGCTGCT TGCTGGGATA TGCACGGCTT TAACCGCCTT
GGTGGTAACT CAGTTTCTGA GACAGTTGTC GCTGGCATGA TCGTTGGTGA TTATTTTGCA
GATTATTGCG CTAGCCACGA GATCGAGATA AACACAGCTG ATATCGAGAA ATTTGTTAAA
AAACAAGAAG ACTATCTAAA TAGCCTCGTC ACAAAAGAGG GTAAATTTAA CGTCTTTGAT
ATCAAAAACA AGATGAAAGA GGTAATGTGG GAGCACGTTG CGATATTTAG AACAGGCAAA
GGTCTAGAGC TTGCTGTTAA AGAGCTTGAA GCACTTTATA AAGAGTCACT TGATGTAAAA
GTAAGCAACA AAGCACTATT TGGCAACCCA GAGCTTGAAG AGGCTTACCG CGTGCCAAAG
ATGCTAAAAC TAGCGCTTTG CATCGCAAAA GGTGCGCTTG ATAGAACAGA GAGCCGTGGT
GCTCACTGCC GCGAAGACTA TCCAAAGAGA GATGACCTTA ACTGGCTAAA TAGAACGCTT
ACAAGCTGGA AAGAAGGCGA CACTATGCCA ACTATCACTT ATGAGCCACT TGATATCATG
AAGATGGAGA TGCCGCCAGC ATTTAGAGGT TATGGTGCAA AAGGAAATAT CATCGAGCAT
CCAAACAGCG CTATCCGCCA AAAAGAGGTC GATGAAATTC GCGAGAAAAT GCAAGCTGAA
GGTAAGAGCA GACAAGAAAT TCAAGAGGCT TTGATGCACT ATGACCTTCA ACCAAAATAT
AAAGCACCAA ATGAAAGAGC AGGTATAGGA AATGAGTAG
|
|---|
| Protein sequence | MNVKYYDALV IGGGLAGLRA AVAAGEKGLS TVVLSLIPVK RSHSAAAQGG MQASLGNSKM
SEGDNEDVHF ADTVKGSDWG CDQQVARMFC QTAPKAIREL AAWGVPWTRI TKGERSAIIN
AQKTTIVEKE EVHGLIHSRD FGGTKKWRTC YTADATGHTM LFAVANEALK HNVEIHDRKE
AIALIHQNNR CYGAIVRDLV NGEITAYVSK GTLIATGGYG RVYKHTTNAV VCEGIGAAIA
LETGVAQLGN MEAVQFHPTP IVPSGILLTE GCRGDGGILR DVDGYRFMPD YEPEKKELAS
RDVVSRRIME HIRAGKGVPS PYGYHVWLDI SILGREHIEK NLRDVQEICE IFNGIDPADT
EVYTDETGHQ RGKGWAPILP MQHYSMGGIK TKPTGESPTL AGLFSAGEAA CWDMHGFNRL
GGNSVSETVV AGMIVGDYFA DYCASHEIEI NTADIEKFVK KQEDYLNSLV TKEGKFNVFD
IKNKMKEVMW EHVAIFRTGK GLELAVKELE ALYKESLDVK VSNKALFGNP ELEEAYRVPK
MLKLALCIAK GALDRTESRG AHCREDYPKR DDLNWLNRTL TSWKEGDTMP TITYEPLDIM
KMEMPPAFRG YGAKGNIIEH PNSAIRQKEV DEIREKMQAE GKSRQEIQEA LMHYDLQPKY
KAPNERAGIG NE
|
|---|
| |