| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0396 |
|---|
| Symbol | |
|---|
| ID | 5596571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 1397243 |
|---|
| End bp | 1398229 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640929962 |
|---|
| Product | sensor histidine kinase |
|---|
| Protein accession | YP_001467241 |
|---|
| Protein GI | 157164191 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.12016 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTAATA TCGATATACA AAATGGCCTA AAAAGCCTGA TAGAGCAGAC CTATCTGATA
GAGCGTGAGT ATAAAAATTT GACTGCTTCT TATATGAGCT TGCAAGGTTT TATAAAAGAT
ATCGTGGAAA TTTTGCCAAA TGCCATTTGG GTGCTTGATG AAAATGATGA AATTTTCTTG
CAAAACTCAG AGGCACAAAA GCTTGGCAAA GCGCTAAATT TCATCCCAAA AGATGAGGGT
GAGCTAAATT TTGGCTCACA AATTTATCTA GTAAAAAAGG TGGTCAAAGA CGATAAAAAG
ATCATCTCAG CCACTGACAT AACGCAGGAA AAACGCACCG AGCGCCTAGC CTCGATGGGT
CAAGTAGCAG CGCACCTAGC TCACGAGATA AGAAACCCCA TAGGCTCTAT CTCGCTTCTA
AACTCCACGC TTTTAAAAAG GGCTGAGCCA AAAATTTTGC CTATCGTCGA GCAGATACAA
AAGGGAATTT GGCGGGTTGA ACGCATCATC AAAGCCACAC TTCTTTTTAC AAAAGGGCTT
AGCATCACGC CAAAGGAATT TAACTTTTTA GATATCAAAA GCGAGTGCGA GGAGGCGCTT
AAATTTTATG AGTATTCAAA AGATATAAAT TTTGAGCTAA ATTTCCCTGA CGCCCTTTAT
AGTGGCGACT TTGACCTCAT CGCGATGGTC TTTCAAAACA TTTTATTTAA CGCGATTGAC
GCTATCGAAG AGGACGAAAA CGACGAAGGC GTGGTGAGAC TAAGCTACGA AAAGACGCCA
AATGAACATA AATTTATAGT CTATGACAGC GGTGTCTCTA TAAAAAATGA AAATATCGTC
TTTGAGCCAT TTAAGACGAG CAAACTAAAG GGCAATGGCC TAGGACTGCA CCTTTGCCTG
CAGATAATAG AAGCGCACAA GGGCAGCATA GAGATAACCC TTGAGCCAAA GACATTTTGT
ATAAATTTAC CTATAAAGGA GAAGTGA
|
|---|
| Protein sequence | MSNIDIQNGL KSLIEQTYLI EREYKNLTAS YMSLQGFIKD IVEILPNAIW VLDENDEIFL
QNSEAQKLGK ALNFIPKDEG ELNFGSQIYL VKKVVKDDKK IISATDITQE KRTERLASMG
QVAAHLAHEI RNPIGSISLL NSTLLKRAEP KILPIVEQIQ KGIWRVERII KATLLFTKGL
SITPKEFNFL DIKSECEEAL KFYEYSKDIN FELNFPDALY SGDFDLIAMV FQNILFNAID
AIEEDENDEG VVRLSYEKTP NEHKFIVYDS GVSIKNENIV FEPFKTSKLK GNGLGLHLCL
QIIEAHKGSI EITLEPKTFC INLPIKEK
|
|---|
| |