| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0332 |
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| Symbol | |
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| ID | 5596499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | + |
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| Start bp | 1912040 |
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| End bp | 1913089 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640930464 |
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| Product | DNA polymerase III delta prime subunit HolB |
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| Protein accession | YP_001467734 |
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| Protein GI | 157164638 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTAAAA TTTCACTTTA TATCTCACAA AAGATCATCG TCTTTTCACT TCTAGCTGTA
CATACTTTTT ACCTAGTTAT GTTCTGCCTC ATGGGCGAAG AAATTTTGGC TGTGGCAAAC
ATCCTTTCTG TTAGCATATA TCTTTTTGCA CTAAAGATAC TCTTTGATAG CGAAGAGAAC
AACAAGATCG TGATGCTCAT CTTGCAAGTA GAAATTTTAC TCCACGCCTC ACTTTGCGTC
TTTATCCTTG GTCTAGGCTG GGGCTTTGAA ATTTTATTTT TAACATCGAC AATTAGCCTC
TTTTTCTTAT CAGTTAGCTT TAAAATGTTA AGCAGAATTA TCTCTTTGCT AGATATCGCG
GCTTTTTTAC TTTTTTATCT AGTGATAGAT CTACCAGCAA AGGACGATCC TTTATACAAA
GAGATATTTT TTGTATTTAA TCTAACTGCA TCTTGCGTAT TTGCTGTCTT AACCTCATTT
TTACTAGAGA GCTCAAATTT ATTTATATTC TTAGGCATCT TAGAAGAGAA AGAATCAGCC
AAAGCTGTCT TTAACCACGA CCCACTAACT GGGCTTTTAA ACCGCGCCTC AATGCAACAA
ATTTTTAGAC AAAAGAATTT ATTTGACGGC AACGACTTTG CTATCGTGAT GTGCGACATC
GATAACTTTA AAAAGATAAA TGATACCTAC GGACACGGCG CAGGCGATGA AGTGCTAAAG
AGCCTTTCTA AAATTTTCAA AAACGCTTTT AGAAATGAAG ACAGGGTTGC GAGATTTGGC
GGCGAGGAGT TTTTGGCTGT TATCTTTGAT GTTAAAAAAG CAAAAGCAGT TAGCATCTTA
GAGCGTATCA GAGAGACGCT TAATCAAAAT GTCGTTGAAT TTGAAAACCA TAGGATAATA
GCTACTATGA CCTTTGGTGT CGTGGCTCAC AGCGGCCATA CTGAGGTAAA TATCGAGCGT
ATGATCAAGC AAGCTGACGA GCTACTTTAC GTTGGTAAGC GAAATGGTAA AAATATCGTT
ATGAGTGCGG ATTACGATCC AAAAGGATAA
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| Protein sequence | MPKISLYISQ KIIVFSLLAV HTFYLVMFCL MGEEILAVAN ILSVSIYLFA LKILFDSEEN
NKIVMLILQV EILLHASLCV FILGLGWGFE ILFLTSTISL FFLSVSFKML SRIISLLDIA
AFLLFYLVID LPAKDDPLYK EIFFVFNLTA SCVFAVLTSF LLESSNLFIF LGILEEKESA
KAVFNHDPLT GLLNRASMQQ IFRQKNLFDG NDFAIVMCDI DNFKKINDTY GHGAGDEVLK
SLSKIFKNAF RNEDRVARFG GEEFLAVIFD VKKAKAVSIL ERIRETLNQN VVEFENHRII
ATMTFGVVAH SGHTEVNIER MIKQADELLY VGKRNGKNIV MSADYDPKG
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