| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0171 |
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| Symbol | rplA |
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| ID | 5596541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | + |
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| Start bp | 659046 |
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| End bp | 659747 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640929239 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_001466542 |
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| Protein GI | 157164773 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0655529 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGAAAAA CTAGTAAGAG ATTTCAAGAA TTGCTCAAAA AAGTAGAGCA AGACAAAATT
TATAATCTTA GCGAGGCTAT CGATACAGTA AAAACTCTAG CTTCTGCTAA ATTTAATGAG
ACAGTTGAGA TTGCGTTAAA ATTAAACGTT GATCCAAGAC ATGCAGATCA AATGGTTCGT
GGTTCAGTTG TTTTACCAGC TGGTACAGGC AAAGTTGTAA GAGTTGCTGT TATAGCAAAA
GATGCTAAAG CTGATGAGGC AAAAGCTGCT GGTGCTGACA TAGTTGGTGC CGATGATCTA
GTTGAGGATA TCCAGAAGGG TATAATGAAC TTTGATGTTC TTATAGCTAC TCCAAATTTA
ATGGGTCTTG TAGGTAAAGT TGGTAGAATT TTAGGACCGA AAGGTTTAAT GCCAAATCCA
AAAACTGGAA CAGTTACAAT GGATGTTGCA CAAGCTGTTA ATAATGCAAA AAGTGGACAA
GTAAATTTCC GTGTTGATAA GCAAGGAAAT ATACATGCAG GTCTTGGTAA GGTCAATTTT
ACTAAAGAGC AATTAAATGA AAATATTTCA ACATTTATTA AAGCTATTAA TAAACATAAA
CCTGCGACTG CAAAAGGTAG ATATGTAAAA AATGCTTCAT TGTCTTTAAC AATGAGCCCT
TCTGTAACTC TTGATACTCA AGAAGTTATG GACTTAAAAT AA
|
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| Protein sequence | MGKTSKRFQE LLKKVEQDKI YNLSEAIDTV KTLASAKFNE TVEIALKLNV DPRHADQMVR
GSVVLPAGTG KVVRVAVIAK DAKADEAKAA GADIVGADDL VEDIQKGIMN FDVLIATPNL
MGLVGKVGRI LGPKGLMPNP KTGTVTMDVA QAVNNAKSGQ VNFRVDKQGN IHAGLGKVNF
TKEQLNENIS TFIKAINKHK PATAKGRYVK NASLSLTMSP SVTLDTQEVM DLK
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