Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0145 |
Symbol | |
ID | 5597304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | + |
Start bp | 870174 |
End bp | 871436 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640929436 |
Product | TPR repeat-containing protein |
Protein accession | YP_001466731 |
Protein GI | 157165562 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.116417 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATTGGC GTAAAATTTT AATAATTTTT ATAAGCGTAT TTTTTAGCAC GCATCTACTT GCAGATGATA ACAAAAGTGT AAATTTACGC CTAATGCAAG CTCTCATCTC GCAAGATAGT GGCGACGTAA ATGCTAGTAT CCAGACCTAT CTAGGGCTTT TTAAAGAGAC AAATCAAAAA ACCTATCTAA AAGAGGCGAT CAAGCTAGCC TTTGCTACAA AAAATGAAAA TTTAGATAGC CTTATGAGCG ATGGCGAGAA GAGTTTAAAA GACGATAGCG ATTTTATCAG GATCAAGGTT GCAAATTTAG TCAATCTCTC TAAGCTAAAC GAGGCAAAAG AGCTGATGCA AGAGCTTGCT ACAAAAGAGC CAAACGCCCA AAATTTGCTC ATGCTTGGCA CTATTTGCAT GATGCAAAAT GATACGGTAA CGGCGCTAAA ATACTTTGAA GAGGCATACT CGCTAAAGCC TGAAGAGGAG AATTTGCTCC GCATTGTTGA TATCCTTTTA AACCGCATGG ACAATGTAAA TGATGCGACA AAATACCTCG AGAAATTCCG CGAGGAGCAG GGCTGCACTC AAAAGACATG CGAGCTTTTG GCTGAAATTT ACTCTCAGCA AAGAAATTTC CCAAAGGTGA TCGAGCTTTT TGAAGAGATA TACGACATCA CTCACGACAC CTCTTATCTT GACAAGATCG TGCAGTATTT TGTCTATGCT AAAAATTATA AAGCGGCTAT TGAAATTTTG AAAAAATATG GCTACAACGA CGCCACACTT ATGGATCTTT ACGCTGCTAC TGGAAATTTT GGTGATGCAT ACGTTTTGGC GGTTAAAATT TATAACGATA GCAGGGATCT AAATTTCTTA GCAAAGGCCG CCATCTACGA GTATGAGATG AACAAAGATA GCCTGGATGA AAAGAAGATC ACTGATATCT TAGATAAATT TGAAGCTAGC GTGCCAAAGC TTAATAACGA TATGTTTTTT AACTACTACG GCTACTTGCT CATTGATCAC GAGATAGACC CTAGAAAGGG CGTGGAGATG GTGCAAAAAG CACTTGAGAT CTCGCCTGAC TCGCCTTACT ACGAGGACTC GCTAGCGTGG GGCTACTTCA AGCTTGGCGA GTGCAAAAAG GCAAAGGGCA TAATGATGCA CGCGATGAAA GATGTTGATT TTAGGACTTC AAAAGAAGCA AAAGAGCACT TGCATCTAAT CGAGCGCTGC ATAATAAATT TAAATAAAAG GCTTAAAAAA TGA
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Protein sequence | MHWRKILIIF ISVFFSTHLL ADDNKSVNLR LMQALISQDS GDVNASIQTY LGLFKETNQK TYLKEAIKLA FATKNENLDS LMSDGEKSLK DDSDFIRIKV ANLVNLSKLN EAKELMQELA TKEPNAQNLL MLGTICMMQN DTVTALKYFE EAYSLKPEEE NLLRIVDILL NRMDNVNDAT KYLEKFREEQ GCTQKTCELL AEIYSQQRNF PKVIELFEEI YDITHDTSYL DKIVQYFVYA KNYKAAIEIL KKYGYNDATL MDLYAATGNF GDAYVLAVKI YNDSRDLNFL AKAAIYEYEM NKDSLDEKKI TDILDKFEAS VPKLNNDMFF NYYGYLLIDH EIDPRKGVEM VQKALEISPD SPYYEDSLAW GYFKLGECKK AKGIMMHAMK DVDFRTSKEA KEHLHLIERC IINLNKRLKK
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