Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CBUD_1717 |
Symbol | phoR |
ID | 5458906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Coxiella burnetii Dugway 5J108-111 |
Kingdom | Bacteria |
Replicon accession | NC_009727 |
Strand | + |
Start bp | 1712753 |
End bp | 1713511 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | |
Product | phosphate regulon sensor protein |
Protein accession | YP_001425050 |
Protein GI | 154707337 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0057387 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATACAAA GAACGCATAA ATTAAATTTA AAAAAATTAC CCAAAGCAGT TAGAGAACAT ATCAATCAGC TCGAACGCAT TCGTAGCGAT TTTGTTGCCA ATGTTTCTCA TGAACTTCGC ACGCCACTGA CGGTAATTCG CGGCTATTTA GAGACGCTAC TTAAAAAGGA AGTAAGAGAC TCGAAATCCT ATCAAAAAAT TTTCCAACAA ATGTATCAAC ACAGCGCGCG AATGGAAACA ATTATTGACG ATCTTTTGTT GCTTTCTAGG CTGGAAAGTG ACGATCATCC TACCGAAGAA AAAATGAACG TTGCTGTCCC TGAAATTTTA AAAACGCTTT GCGCGGATGC CGAACGAATA AGCGGCGAAA AACAACACTT CATTCAATTA AAAGCCGAAC CTAATTTATA CATTAGCGGC TCAGAAGAGG AATTAAAAAG TTTGTTTTCC AACATCATCA TTAATTCCGT GAAATACACG CCATCCAAAG GCCGGATTAA TGTGAAATGG TATCGAGATG ACGATCACGC CGTATTTAGT GTGGTCGACA CCGGCATTGG CATCGCCAAG GTCCATATCC CCAGAATTAC CGAGCGTTTT TATCGAGTAG ACAAAGCCCG TTCGCGCGAA AGCGGCGGGA CGGGACTTGG ACTTGCGATT GTCAAACACG TCTTAATGCG CCACGATGGG GAATTACATA TTGAAAGCGA ACCCGGTAAA GGAAGCATTT TTACCTGCCG ATTTCCACTA GTTTCCTAA
|
Protein sequence | MIQRTHKLNL KKLPKAVREH INQLERIRSD FVANVSHELR TPLTVIRGYL ETLLKKEVRD SKSYQKIFQQ MYQHSARMET IIDDLLLLSR LESDDHPTEE KMNVAVPEIL KTLCADAERI SGEKQHFIQL KAEPNLYISG SEEELKSLFS NIIINSVKYT PSKGRINVKW YRDDDHAVFS VVDTGIGIAK VHIPRITERF YRVDKARSRE SGGTGLGLAI VKHVLMRHDG ELHIESEPGK GSIFTCRFPL VS
|
| |