Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CBUD_1243 |
Symbol | |
ID | 5458774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Coxiella burnetii Dugway 5J108-111 |
Kingdom | Bacteria |
Replicon accession | NC_009727 |
Strand | - |
Start bp | 1219782 |
End bp | 1222751 |
Gene Length | 2970 bp |
Protein Length | 989 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | |
Product | lanthionine synthetase (lantibiotic biosynthesis) |
Protein accession | YP_001424603 |
Protein GI | 154705870 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.170162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCGACA TTATCGAAGT AATCAAGGCT AGTTCGCCAG ATGCTACTCA TCAATGGAAA AATTTGATTA CTGCGTTAGA AAAACGAGAA AAACATTTAT TAGCGTTATT ATCTTCATTA TTTGCACATG CAGAAAACTT CTTTTTAGAA ATTATCAACG AAACAGGCTC GCCGCTTAGC CAAATCATCA CTAAACAAAC CTTGATGGAC TTTATCCAGC GGGACTTAAC TAACTTACTG TTACCGCTGA TCAGCCGTGT TTGTATTTAT GAGATGTATG TCGTGGCTGA AAATCACAAA CTTCAAGGAG AGACTCCTGA AAAACGGTTT GATTATTTTG TATCTCTCTT GAGTGATCCA AAAACTGCCT TATTGCTTTT TGAGAAATAT CCTCTTTTAA AGACACTGAT TGACACCGTT TATCAACAAT ATTTAGAAAA CCAAACGCAA TTGATGCAAA GGCTGGCAAA TGATTACAAA GAAATTTGCC AGTTCTTTTT TAAGAAAAAA ATTGAACGCC CGTTATTCTT AACTCGCATC ACTTCTGCAG GGGATAGACA TAACCAAGGG CGTTGCGTTG CCATTTTGGA ATTTTCTAAT GAAAAAGACA ACTTTAAACT CGTTTATAAA CCCCGCTCGC TTCGCATTGA TCAGGCCTTT CAACAACTGA TAGATTGGTT CAATCAAAAA TTATCGGCGC AATTGTATTG CCCGAAAATA CTCCTTAAAC CGGAATACGG ATGGTGCGAA TTTATTACTT ACACTGAGTG TAAAAACAAA AAAGAAGTAG CCTTGTTTTA TCAGCGTTTG GGCATTTTGT TAGGCATCAG TCACTTATTA GCTTCCACGG ATATTCATGC TGAAAACATC ATCGCACATG GTTCTCATCC CGTCTTTGTT GATTTTGAAT GCGCGTTACG TCCCCTCTTT AAGAGCGATG ATCAAAAACC ATCGCCAGAA GTGCCACCCC ATTTGGTTAG TGATACCGCG CTTTTGCCTG CCAGATTTAT GGCGCGAGAA GACTATAACG GTATTGATTT AAGCGGCATT TTTTGGCCCG ATGAACAAGA AGCGCCTTAT CGGCGCATGT GCTGGAAAAA AGTAGGAACA GACGAGATGT ATTTAGTACG TGAAAAAAGC ATTCTGCCGA CTCAGCAAAA CATGCCGCGA TTAAAGCACG ATCACGTGGA CCCTTTATCT TATGAAAAAG ATATCAGCAG TGGTTTTACC CGCTGTTATC AATTAATTCT TGATCATAAA AAAGAATTAT TATCGGATCA TTCGCCGCTG AATGCTTTTC AAAATGTTCC CATTCGCGTC TTATTTCGGG CAACGGTTGT TTATGCGAAG CTTTTATTCG AAAGTTATCA CCCTTTGTTG CTTTATGATA ACGACAAGCG CCGAGATCAT TTCTTGTGGC TAAAAGAACA TGCAAAACCG CTGATTTTTT CTGAAGAGAT ACTGGATTCC GAAATTAACG ATTTATTATC TAACAATATT CCCTATTTTT CATGTCAGGC TGATAAAGAA CAAGTTTTTA GCCCTACTCA CCAGCAGATT GCTTTACAAT TTCGTTTCTC AGGATTAGAG CGCGTAAAGC AGCATTTGAT CCACCGTTTC AACAAAAATG ATTTGCGATT ACAATTGCTC ATTATCGAAA ATAGTTTTAT GACATTACGG TTAAATCGAG GTTTGGCTTA CGAAAAAAAC ATTCCTGTTT CCGATGAGAT ACCTTCATCC AGCAGAAATA TAAAAGATGA AGCTTTCATG CTAGCCAAAA AAGAACTCGA CCGATTAATG GATTATGCAA TTATTGGTGA CAATCGAATT ATGTGGCCTT GTATTGAAAT GGTTGGCTCC GACGCATGGT CACCTGCCTT TACCGACATT AGTCTCTATA AAGGAATTGC AGGAATTTCC CTTGTCTTTG CATACGCAGC TTCTCTTTTT GAAAGTAAAC CCTATGAAAG GATTGCTCGA TTAGGCTTAA ATAGTTTGAT TGAGGTATTT TCAGAGCAAA AAAAGGAAGC GATTGTTAGT ATGGGTGTGG GTGCTTTTAC AGGGTTGGGC GGCTTGATCT ATGCACTGTC GGTTTTCGAT CAGTTCATAC CGGACAAACG TATTCGCCCA ATGCTAGAAA TACTATTTAC ATGGATGGAT GAGTTTATTG AGAAAGACAA TATCTTGGAT GTCTTGAGCG GTTCAGCCGG TTTTATTCCA TTGCTTTTAT CAGCACAGAG CTTTATTAAT CCCAAAAGGA AGATAATGCT GCTTAAAAAA GTGGCAAAGC ATATTCTTAC TCAATACCCA AACCCTGCCA AATTATTTAC GGGATATAAA AATCCATACG CGAATCAGCC GCTGCTAGGT GCCTCACATG GTGCGGCGGG ATTTATATGG GCTTTAGTGA AAGCCAATTA TTTTTTGCAT GACAAAAATA TTGAGCAATG GATAAAAAGC GCGCTTGCTT ACGAACGCAG CCACTTCGAT TATGAAAAAA ATAATTGGCC GAGCTTCCAA AAGCAGAATC GAGAGCATTA TCGAGGGGAT AAATTTATGA CAGCATGGTG TCACGGAGCA GCTGGCATTG GTTTAACCCG GTTAGATAGT CGAGAATTTT GGCAAGATGA TTTAATTGAT GAAGAGATTG ATAGGGCAAT ACAGACTACT TTAAAAGAAG GCTTCGGTTT GAGCACGACC CTTTGTCATG GTGACCTTGG GAATCTCGAC TTTTTGTTAG AAGCCAGCCA AAAAAATCCA TCGAAAAAGT TACAGGACAT TTTTCACACA CACGCCGTCT TTGTCGTAGA GCGCATTAAA AAGCATGGTA TTTCTTTAGA CATTAGAGGC ACACTGCCAT TCCCTGGGCT CATGCTAGGG GTCGCTGGTG TTGCTTATCA GCTAATGCGA GTTGCTGAAC CTCAACGCTT ACCTTCCATT CTACTGCTTA AATTACCAAC TCTTTGGTAG
|
Protein sequence | MIDIIEVIKA SSPDATHQWK NLITALEKRE KHLLALLSSL FAHAENFFLE IINETGSPLS QIITKQTLMD FIQRDLTNLL LPLISRVCIY EMYVVAENHK LQGETPEKRF DYFVSLLSDP KTALLLFEKY PLLKTLIDTV YQQYLENQTQ LMQRLANDYK EICQFFFKKK IERPLFLTRI TSAGDRHNQG RCVAILEFSN EKDNFKLVYK PRSLRIDQAF QQLIDWFNQK LSAQLYCPKI LLKPEYGWCE FITYTECKNK KEVALFYQRL GILLGISHLL ASTDIHAENI IAHGSHPVFV DFECALRPLF KSDDQKPSPE VPPHLVSDTA LLPARFMARE DYNGIDLSGI FWPDEQEAPY RRMCWKKVGT DEMYLVREKS ILPTQQNMPR LKHDHVDPLS YEKDISSGFT RCYQLILDHK KELLSDHSPL NAFQNVPIRV LFRATVVYAK LLFESYHPLL LYDNDKRRDH FLWLKEHAKP LIFSEEILDS EINDLLSNNI PYFSCQADKE QVFSPTHQQI ALQFRFSGLE RVKQHLIHRF NKNDLRLQLL IIENSFMTLR LNRGLAYEKN IPVSDEIPSS SRNIKDEAFM LAKKELDRLM DYAIIGDNRI MWPCIEMVGS DAWSPAFTDI SLYKGIAGIS LVFAYAASLF ESKPYERIAR LGLNSLIEVF SEQKKEAIVS MGVGAFTGLG GLIYALSVFD QFIPDKRIRP MLEILFTWMD EFIEKDNILD VLSGSAGFIP LLLSAQSFIN PKRKIMLLKK VAKHILTQYP NPAKLFTGYK NPYANQPLLG ASHGAAGFIW ALVKANYFLH DKNIEQWIKS ALAYERSHFD YEKNNWPSFQ KQNREHYRGD KFMTAWCHGA AGIGLTRLDS REFWQDDLID EEIDRAIQTT LKEGFGLSTT LCHGDLGNLD FLLEASQKNP SKKLQDIFHT HAVFVVERIK KHGISLDIRG TLPFPGLMLG VAGVAYQLMR VAEPQRLPSI LLLKLPTLW
|
| |