Gene CA2559_12288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCA2559_12288 
Symbol 
ID9297947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCroceibacter atlanticus HTCC2559 
KingdomBacteria 
Replicon accessionNC_014230 
Strand
Start bp2666158 
End bp2668383 
Gene Length2226 bp 
Protein Length741 aa 
Translation table11 
GC content38% 
IMG OID 
Productputative polyribonucleotide nucleotidyltransferase 
Protein accessionYP_003717199 
Protein GI298209020 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACCTC AAGTATTTAA AGAAACCATC GATTTAGGTG ATGGTAGAGA AATTACTATT 
GAGACTGGTA AACTTGCTAA GCAAGCACAC GGTTCGGTAG TGGTACAATC TGGCAAATGT
ATGCTTCTTT GTACCGTAGT GTCTAACTAC AAACAAAGTG ATGTGGACTT TCTTCCACTT
ACGGTAGATT ACCGTGAAAA ATTTGCAGCT GCAGGACGCT ATCCTGGTGG TTTCTTCAAA
AGAGAAGCAA GACCAAGTGA TGGTGAAGTA TTAACAATGC GTCTAGTAGA CCGTGTTTTA
CGTCCTCTTT TCCCAAAAGA TTATCATGCA GAAACTCAAG TGATGATTCA GTTAATGTCT
CATGACGACG ATGTAATGCC AGACGCAATG GCTGGTTTAG CAGCATCTGC AGCAATTCAA
CTTTCAGATT TCCCTTTTGA GTGTGCTATC TCAGAAGCAC GCGTAGGTCG TGTAAATGGG
GAATTTGTAA TCAACCCAAC AAGAACACAG TTAGCAGAAT CTGACATCGA TATGATGATT
GGTGCATCTG CAGACTCTGT AATGATGGTT GAAGGTGAAA TGGATGAGAT TTCTGAAGAA
GAAATGACAG AAGCCATTAA GTTTGCACAC GAAGCTATTA AAGTACAATG TGAGGCTCAA
GTAAAATTAG CTGAAGCATT TGGTAAGAAA GAGACTCGTG AATACGCTGC AGAACGTGAA
GATGAAGATC TTGCTAAGAA AGTGCATGAT ATGGCATATG ATAAAGTTTA TGCTATTGCA
CAAGCTGGAT CTGCTAAGCA CGAACGTAGC CAAGCATTTT CTGATATTAA GGATGAAATT
ATTGCTACCT TCTCTGAAGA AGAACAAGAA GATTTTGGCA GCTTAATCTC TAAGTATTAC
TACAAAGCAG AAAAAGCTGC TATTAGAGAT TTAACGCTTA ATGAAGGTTT ACGTCTTGAT
GGTCGTAAAA CTACAGATAT AAGACCTATT TGGTGTGAGG TAGATTATTT ACCATCTGTA
CACGGATCTT CAATATTTAC CAGAGGAGAA ACTCAAGCTT TAGCTACAGT AACCTTAGGT
ACATCACGAG ATGCAAATAT GATTGATATG CCTTCTTATG AAGGTGAAGA GCGTTTTTAC
TTACACTATA ACTTCCCTCC TTTTTCAACT GGTGAAGCAC GACCTATTCG TGGAACATCA
CGTAGAGAAG TTGGTCATGG TAACTTAGCA CAACGTGCCT TAAAAGGTAT GGTTCCTGAA
GATTGTCCTT ACACCGTACG TGTTGTTTCT GAAGTATTAG AATCTAATGG TTCTTCTTCT
ATGGCTACAG TATGTGCTGG TACAATGGCA ATGATGGATG CTGGTGTACA AATGAAAAAA
CCAGTTTCTG GTATTGCAAT GGGATTAATC TCTGATGCAG AAAGTGGAAA GTATGCTGTA
CTATCTGATA TCTTAGGTGA TGAAGATCAC TTAGGTGATA TGGACTTTAA GGTAACTGGT
ACTGCAGATG GTATTACAGC TTGCCAAATG GATATTAAAG TAAAAGGTTT ATCATATGAG
ATTTTAGTAA ATGCGCTAAA ACAAGCTCGT GATGGTCGTT TACATATCTT AGAGAAGTTA
ACAGATACTA TTTCTCAACC AAATGAAGAT GTAAAATCTT ATGCTCCTAA AATGGTTTCT
GTAAGAATAC CTAATGAGTA TATTGGTGCA ATGATTGGAC CTGGTGGAAA AGTAATTCAA
GAACTTCAAA AAGAAACAGG TACAACTATC GTTATTAACG AAGATCCTGT TACAGAAGAA
GGTATTATTG AAATACTTGG TACTGGGCAA GAAGGTATTG ATGCTGTACT AGCTAAGATA
GACTCTGTAA CGTTTAAACC ACAAGTTGGT AGCGTTTACG AAGTTAAAGT TATTAAAATG
CTAGACTTTG GTGCTGTTGT AGAATACACA GAAGCTCCAG GAAATGAAGT ATTACTGCAC
GTTAGTGAAC TTGCTTGGGA ACGCACAGAA AATGTTTCTG ATGTAGTAAA ACTAGGTGAT
ATTATTGATG TTAAGTACTT TGGTATAGAT AAACGTACAC GTAAAGAGAA AGTATCTCGT
AAAGCACTTT TAGAAAAGCC AGAAGGTTAT AAAGAAAGAG CTCCTAGAGA AGACAAACCT
CGAGGCGACA GAAACCGTGA TAGAAATCGT AGTGGTGATC GCGATAGAAA CAAAAGCAGA
GATTAA
 
Protein sequence
MIPQVFKETI DLGDGREITI ETGKLAKQAH GSVVVQSGKC MLLCTVVSNY KQSDVDFLPL 
TVDYREKFAA AGRYPGGFFK REARPSDGEV LTMRLVDRVL RPLFPKDYHA ETQVMIQLMS
HDDDVMPDAM AGLAASAAIQ LSDFPFECAI SEARVGRVNG EFVINPTRTQ LAESDIDMMI
GASADSVMMV EGEMDEISEE EMTEAIKFAH EAIKVQCEAQ VKLAEAFGKK ETREYAAERE
DEDLAKKVHD MAYDKVYAIA QAGSAKHERS QAFSDIKDEI IATFSEEEQE DFGSLISKYY
YKAEKAAIRD LTLNEGLRLD GRKTTDIRPI WCEVDYLPSV HGSSIFTRGE TQALATVTLG
TSRDANMIDM PSYEGEERFY LHYNFPPFST GEARPIRGTS RREVGHGNLA QRALKGMVPE
DCPYTVRVVS EVLESNGSSS MATVCAGTMA MMDAGVQMKK PVSGIAMGLI SDAESGKYAV
LSDILGDEDH LGDMDFKVTG TADGITACQM DIKVKGLSYE ILVNALKQAR DGRLHILEKL
TDTISQPNED VKSYAPKMVS VRIPNEYIGA MIGPGGKVIQ ELQKETGTTI VINEDPVTEE
GIIEILGTGQ EGIDAVLAKI DSVTFKPQVG SVYEVKVIKM LDFGAVVEYT EAPGNEVLLH
VSELAWERTE NVSDVVKLGD IIDVKYFGID KRTRKEKVSR KALLEKPEGY KERAPREDKP
RGDRNRDRNR SGDRDRNKSR D