| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_12233 |
|---|
| Symbol | |
|---|
| ID | 9297936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | + |
|---|
| Start bp | 2653562 |
|---|
| End bp | 2654755 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003717188 |
|---|
| Protein GI | 298209009 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.147492 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCTT CTGCGAAAGG CTGGATTAAG AAGCACTTAC CTCATTTTAT AACAGCCACT
CTTCCCTATT TAGGCGAAGA GAAAGATGTT TATACGCAGT TTAGAGAATC TGGTTTCATT
TATGGTACTT CTGTAAAAAC TTTAAATACC GAAGAAACTA AACGACTTAA GTTAACAGAG
GAAGAACTTA CAAAGGTTAA TTTATTTGAT GCCTTATGTT ATATATATTT TCAATCTATT
GAAAATGCAT CTGAAGAAGA TTGCGTTCTT TCTATAATTG AATTCTACAG AAGCTTAAAT
AGTAAAACGT ATACATTTTT GAAATTACCT AGTGTTTCTA AACTTTCTAA CTATGAAACC
TTAGAAAACT TACTTCAGCA ACGTATACAA ACCAATGAAT CTTTTATAAA AAAGAACTTT
AGCCATTTAG TAACCAATGC TCTTTTGTTT ATTGATGTCT TAGCTTTCGA TCATTTTTTA
ATGTACAATA ATGATACTTT AAAATACGCA AAGCATATTG AGGCTACTGT TGTTAAATCT
ATATGCTTGT CCTTAAAGCA AAAGGAAAAT AAAGAAGAGT ATGATGAACT ATTACTAAAG
CTCTTTAAAA GCTCTGTTCG TTACAATACC ATTATACACG ATAATGCTGC AGACTTGTCT
GATCTTTCTA TTGATTCTCT TTCTGAAGTT TTAGAACGTT ATTACCTTTT AGATATGTCT
TGCCTTGCGG TTTGGGATGA CAATAGGCTT GACCAAACAG AATTTCAATT TATTTATGAT
CTAGGAGAAG CTTTGAGCAT AAGAAAGGAT TTTGTTGAGC AGGCTTTAAC TCACGTTCAT
TTTTTTATAG AAACGCATAA AAATAAGATT GCATTTTTTC AATACAGTAA TCCTGTAAAA
CACTTTTACA AACAAACTAA CCGTACTGTA AAAGTATTAG TAATAAGAAA TAGAAAACGA
CTCCTAAAAG AATTATCTGA AAGTAAAGAG TTGGTTATCC TCTTGGGACA GTCTACAGTG
CGAGATTTAA ATGATGTGGA AAAACAAAAG GTTAAGGAGC AGCTATTAGA TATTTGTAAA
TCTATACCAT CTCTGGCTAT TTTTTTAGTT CCTGGCGGAA GCATCTTGCT ACCTATCCTT
ATTAAGTTTA TTCCTAAACT ATTGCCAAGT GCATTTAATG AAAACCTAAA TTAA
|
|---|
| Protein sequence | MNPSAKGWIK KHLPHFITAT LPYLGEEKDV YTQFRESGFI YGTSVKTLNT EETKRLKLTE
EELTKVNLFD ALCYIYFQSI ENASEEDCVL SIIEFYRSLN SKTYTFLKLP SVSKLSNYET
LENLLQQRIQ TNESFIKKNF SHLVTNALLF IDVLAFDHFL MYNNDTLKYA KHIEATVVKS
ICLSLKQKEN KEEYDELLLK LFKSSVRYNT IIHDNAADLS DLSIDSLSEV LERYYLLDMS
CLAVWDDNRL DQTEFQFIYD LGEALSIRKD FVEQALTHVH FFIETHKNKI AFFQYSNPVK
HFYKQTNRTV KVLVIRNRKR LLKELSESKE LVILLGQSTV RDLNDVEKQK VKEQLLDICK
SIPSLAIFLV PGGSILLPIL IKFIPKLLPS AFNENLN
|
|---|
| |