Gene CA2559_11188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCA2559_11188 
Symbol 
ID9297725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCroceibacter atlanticus HTCC2559 
KingdomBacteria 
Replicon accessionNC_014230 
Strand
Start bp2431653 
End bp2435339 
Gene Length3687 bp 
Protein Length1228 aa 
Translation table11 
GC content34% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003716979 
Protein GI298208800 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAGAA ACTATTTTAA AAGTGCCGTA TATCTTTCGG TTGTAACATT ATTATGCGCC 
TGTGCGTCCA AAACCACAAG GTATCTTAAT ACAGAGGACA AAATTTACAA CCCAATTTCT
TTAGATACTT TAGGAAGTAC TAAAGAGTAC CAAAGTGTAT ACCTATATGG TAATGCAGGC
AGCAATAAAA ATGGTCCAGA TGAGGCATTA TTACAAAAGT TCCAACAGTT TACTAAGCAA
CATTCAACCA AAGACGATTA TTTAATTTTT CTTGGTGACA ATGTGTATGC CAACAGGCTA
AAAAAAGATA ACAACAAGGA ACAGTTAGAC ATGTTGTTAA ATGTCTTTAA AACCTTTAAT
GGCACACCAT TAATAATTCC CGGAGAAAAT GATTGGAATG ATAATGGTGT TGAAGGTCTT
GAAAAATTAG AAGACTACGT TGAAGAGTTT ATGGGTAAAG ATGAAAATTA CCTTCCAGAA
AATGGCTGTC CAATAGAAAC TATTGATGTA AGTTTTAATA CAGAAATCAT TGTTATAGAT
ACACAATGGT ATATTGAAGA TTGGAGCAAG CAAGCAGAAT TTAATGCTAA ATGTGAAATA
AAAACTAGGG AGAAGTTTAT AAAAGTTCTT ACAGACGAAG TTAGAAAAGC AAGACACAAA
AATGTGCTTT TAGTAATGCA CCATCCTGTT TACTCTAACG GTATTTATGG CGGAGAAATT
TCTAATGATA TTCTATTTAA CCCCAAACCA GAAAACTTAT TCTTACCAAC CATAGGTGCA
CCTTGGACGT TTATGAGAAC TCAAGGAGGT TTATCTAAAC AAGATTTACT CAACCCTTTA
ATGAATGAGT TAATCTCTGA GGTTAAAACA ATAGCAAGAC AAGCACCCTT AATGTTTGTC
TTATCTGCCC ACGAACAATC TTTACAGTAT ATTATACAAG ACAACCTACA TCAAATTATT
TCTGGTACAG GTGGAAAAAA AGAAGGTTCT AGACTAGGAA AGAACGGTCT TTATTCTTCT
GGAAAAGCAG GATTTGCTGA GTTGAGATTA TATGAAGACA GATCTTCAAG AGTTATTTTT
TATGAGCTAG ATGAGAAAGA GAATATAGTT AAAGCTTTTG ATAAAGAGGC CTTTGCCTCT
CCAGAAGATT ATGACCTCTC ACAACTACCT AAAACATATT CAAAAACAGT AAAAACAACA
ATTTATCCTC CAGAAGAAAC TAAGGTAAGT AAACGCTATG AAGAGTTTTT TGGAGAACAT
TACCGCTATT TATATGGTAA GGAAATCGAA GCACAAGTTG TATTACTTGA TACATTATAT
GGTGGTTTAA AAGTAGAACG TGCAGGCGGC GGAAACCAGA CCCAATCTTT AAGACTGGTA
GATAAGAATG ATAAAGAATA CAACATGCGT GCAATTGCTA AAGATGCAGA ACGCTTTTTA
CAATCATCTG GTTACAATGA TTTAGATTCT GATGTGTATT TTGAAGACAC AATTCCTCTG
GAAATTATTG AAGACTTTTA TACAGCTTCT CATCCTTACG GTGCATTTGC CATACCAAAG
CTGGCTGGTG CTATAAATTT AGGACACACC CATCCAAAAT TATTTTATGT TCCCAAACAA
AAAACATTAG GAGAGTTTAA TGAGTATCAT GGTGATCGTT TGTATATGAT TGTTGAAAAA
CCAGATAGCG ATTTTAACAA CGCACATATG TTTGGTTTTA ATAAAGAAGT TGAAAGTACT
TCAGATTTAT TTGAAGAGCT TAGGAAAGAT GAAACTAACG TTATTAATGA GAAAGAATAT
ATAAAAGCAA GAATATTCGA CATACTTGTA GGAGATTGGG ATAGGCACGA AGACCAATGG
CGTTGGGCAC TTTTAGAGGA CACAGAAAAT ACCGGTAAAA ACGTTTACCT ACCAATACCA
AGAGATAGAG ATCAAGTTTT TGCAAAGTTT GATGGAACAT TTATTAAAAC ATTACAAAGT
ATAGTATCGA GCACTAAACA ATTAGGGTTA TATGGTCCAG ATATAGAGTT TATAGATCCT
TTTAGTGAAA GTGCTTTAAA CTTAGACCGT GCGCTACTTC AAAAAACTAG TTTAGAAGAT
TGGTACGAGC AAATTGAACT CATACAAAAA AACATTACTC CAGAAATTGT TGACAAGGCT
TTTAATGATA TGCCTGTAGA ATCTCAAGAT GAAGTAACAG AACAAATTAA GAAAGATTTC
TTAGCAAGGA AAGCTAATTT AAAAAGCATA ATAGAGCGTT ATTATGAGAA TATTATAAGT
TTTCAAACCT TACTCGGTAC AGATAAAGAT GATCATTTTA TAATAACCAA ATTACCCGAT
GGTAAAATTA ACATTGAAGC CTATAGAATT AAAGATGGCA AAGATGAAGA TCTTATTTTT
AATAGAACGT TTAATGATAA AGACACGCAT ACCATCTGGA TTTATGGTTT AGGAGATGAT
GATGTTTTTG AAATTAAAGG TGATAACACA TCTAAAATTA AAATAACAAT TGCTGGTGGT
CTTGGTGAAG ACACCTATAA TTTTAGCAAT GGAAAAAATG TAATTGTATA TGATCAGGAA
CACCAAGACA ATGTAGTTAA AGAAGAAAAC GGTGCAAGAT TTAGAATAAA TGATGTGTAT
GAAAACCATA TTTATGATCC AGAACGCAGG CCAAGTTCTG GAAGTGTATT TGGGCTAAAT
GTAGCCTATA ATCCAGATTT AGGAGCTGTC ACAAAGTTGC TTGTGGGCAA AGAGACACTA
AAGTTTGAGC GCAACCCATT TACAAAAAAG TTTGACTTAC TTACAACATA CTACCCATTA
ACACAAGCTG TAAGTTTTGA AGGCTCTGCT CAATTTGCCC ATTTATTTCA CGATTGGAAT
CTTAAAATCT CAAGCAGAGT AACTAGCAAC AATTATACAG AGAACTTCTT TGGTTTTGGA
AACTCTACAG ACAATCCGTT TTCTAATTAT GATGCTAATA GAATTTACAC AAGACATTTT
TCTGCAGGCG CATCAACTTA CTATAAAGGA GAGTTTGGTA GTGCTTTTGA GATTGGTTTC
AACTATTACA ATGTAGGTAC AGAAGCTTCA GAAGTAATAT CTGGAACTGG TATAGGAGAA
CAAGAAGAGT TTGCCCAAAT ACATTCTACA TATCATTACT TAAGCACAAA TAGTAAAGGC
TTCCCAAATA GAGGAATGGA GTTTAAAGCA AAAGGCTATT TTTCAGATAA TTTATCAAGT
TCTCAAACAA CATTAGCAGT AGATCCGTCA TTAACGTTCT GGAATGCTAT AGATTCTTCT
AGAGATGTTA TTTTAAAAAC ATCTGCTTCT GGGCAATTAC GTTTTGGTGA TGCCATACCA
TTTTACCAAA GCGCTAGAAT TGGAGGAGAA CACAGCTTAA GAAGTTACAG ATTACAACGC
TTTACAGGAC AACAATCTTT AGTAGGAAAT GTGGAGTTAC AGTATAATTT TAAACCGCTT
AAAACTGTTT TCTTACCTAT ACGCAGTTTA GGATATTTAG GATATGATAC TGGTAGAGTT
TGGATAGATG ATGAGTCTAA TTCAAACTGG CACTATAGTT ATGGTGGTGG TATAATATTT
TCCGTTAGCG GCCTTACCTC TAACCTATCT TACTTTCATG GCGAAGAAGG TGGCAGATTT
GCATTCAATA TTTCTTTCGG AATTTAA
 
Protein sequence
MPRNYFKSAV YLSVVTLLCA CASKTTRYLN TEDKIYNPIS LDTLGSTKEY QSVYLYGNAG 
SNKNGPDEAL LQKFQQFTKQ HSTKDDYLIF LGDNVYANRL KKDNNKEQLD MLLNVFKTFN
GTPLIIPGEN DWNDNGVEGL EKLEDYVEEF MGKDENYLPE NGCPIETIDV SFNTEIIVID
TQWYIEDWSK QAEFNAKCEI KTREKFIKVL TDEVRKARHK NVLLVMHHPV YSNGIYGGEI
SNDILFNPKP ENLFLPTIGA PWTFMRTQGG LSKQDLLNPL MNELISEVKT IARQAPLMFV
LSAHEQSLQY IIQDNLHQII SGTGGKKEGS RLGKNGLYSS GKAGFAELRL YEDRSSRVIF
YELDEKENIV KAFDKEAFAS PEDYDLSQLP KTYSKTVKTT IYPPEETKVS KRYEEFFGEH
YRYLYGKEIE AQVVLLDTLY GGLKVERAGG GNQTQSLRLV DKNDKEYNMR AIAKDAERFL
QSSGYNDLDS DVYFEDTIPL EIIEDFYTAS HPYGAFAIPK LAGAINLGHT HPKLFYVPKQ
KTLGEFNEYH GDRLYMIVEK PDSDFNNAHM FGFNKEVEST SDLFEELRKD ETNVINEKEY
IKARIFDILV GDWDRHEDQW RWALLEDTEN TGKNVYLPIP RDRDQVFAKF DGTFIKTLQS
IVSSTKQLGL YGPDIEFIDP FSESALNLDR ALLQKTSLED WYEQIELIQK NITPEIVDKA
FNDMPVESQD EVTEQIKKDF LARKANLKSI IERYYENIIS FQTLLGTDKD DHFIITKLPD
GKINIEAYRI KDGKDEDLIF NRTFNDKDTH TIWIYGLGDD DVFEIKGDNT SKIKITIAGG
LGEDTYNFSN GKNVIVYDQE HQDNVVKEEN GARFRINDVY ENHIYDPERR PSSGSVFGLN
VAYNPDLGAV TKLLVGKETL KFERNPFTKK FDLLTTYYPL TQAVSFEGSA QFAHLFHDWN
LKISSRVTSN NYTENFFGFG NSTDNPFSNY DANRIYTRHF SAGASTYYKG EFGSAFEIGF
NYYNVGTEAS EVISGTGIGE QEEFAQIHST YHYLSTNSKG FPNRGMEFKA KGYFSDNLSS
SQTTLAVDPS LTFWNAIDSS RDVILKTSAS GQLRFGDAIP FYQSARIGGE HSLRSYRLQR
FTGQQSLVGN VELQYNFKPL KTVFLPIRSL GYLGYDTGRV WIDDESNSNW HYSYGGGIIF
SVSGLTSNLS YFHGEEGGRF AFNISFGI