Gene CA2559_05280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCA2559_05280 
Symbol 
ID9296550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCroceibacter atlanticus HTCC2559 
KingdomBacteria 
Replicon accessionNC_014230 
Strand
Start bp1196207 
End bp1196809 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content37% 
IMG OID 
Productshort chain dehydrogenase 
Protein accessionYP_003715820 
Protein GI298207641 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCC TATTAGTTGG TGGTAACGGA ACCATCGGAA GATATTTAAA TACTACCTTA 
TCTAAGGAAC ACGAAGTTAT TGTCGCTGGT CGCTCAAAAG CTGATGTCAT AGTCGACATC
TCAGATTCAG AATCTATCAA GGCGATGTAT GAGAAAGTCG ATAACCTAGA TGCTGTAATT
TGTGTAGCTG GCGAAGCAAA ATGGGAAGTG TTCGAAAATC TTTCAGAAGA AGATTTCTAC
ATCGGTATTA AGAGTAAATT GATGGGGCAA GTTAATTTAG TTCGTATAGG TAAGGACTAT
TTAAATCATC GCGGTTCATT TACACTAACT ACAGGAATTT TAGCAGATGA ACCAGTATAT
ATGACAAGTT CAGCAGCAAT GGTAAATGGT GGCATTCATA GTTTTGTAAA AGCTGTTGCT
CTAGAATTAG GAAATGGCTT GCGTATAAAT GCAGTGTCAT CAGATTTAGT AGAAGACGCC
TACGAAAAAT ATCGGAGCTA CTTTCCAGGA AACATTCCTG TTCCAATGAA AAAAGTAGCA
ATGGGCTATA TTAAAGCCAT TGAGAGTAGA TTAAACGGAC AAATCATTAG ATTGCAAGGA
TAA
 
Protein sequence
MKILLVGGNG TIGRYLNTTL SKEHEVIVAG RSKADVIVDI SDSESIKAMY EKVDNLDAVI 
CVAGEAKWEV FENLSEEDFY IGIKSKLMGQ VNLVRIGKDY LNHRGSFTLT TGILADEPVY
MTSSAAMVNG GIHSFVKAVA LELGNGLRIN AVSSDLVEDA YEKYRSYFPG NIPVPMKKVA
MGYIKAIESR LNGQIIRLQG