| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_04520 |
|---|
| Symbol | |
|---|
| ID | 9296394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | - |
|---|
| Start bp | 1028521 |
|---|
| End bp | 1029174 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003715668 |
|---|
| Protein GI | 298207489 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.771787 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAGTAA GCTGGTACGT GAGCAACAAA TTAAAGACAA AATTTAAAAC CTACTCTAAA
GTACATTTAC AAAATGGAAT GAGTGGTGCA GAGATTGCTG AACGTATGTT AGCAGATCAT
GGCATAACAG ATGTAAAAGT AATTTCGACA CCAGGAATGC TAACAGATCA TTACAACCCA
AGTAATAAAA CTGTAAATCT TAGTGAAGGT GTTTACTCTC AACGCAATGC AGCAGCAGCA
GCAGTTTCTG CTCACGAAGT AGGACACGCA GTACAACACG CTAAAGCATA TTCTTGGTTA
ACCATGCGTA GTAAGTTGGT GCCAATGGTA AGTATTGCTT CTAAATATTC TCAATGGGTA
ATTATGGGAG GTTTAGTATT AGCTGCAACA ACCGCATTTG GTAATACTTT ACTTTTAGTA
GGTATTATTA TGTTTGCTAT GGGAACGTTA TTTAGCTTTA TTACACTACC AGTAGAGTAT
GACGCTAGTA ACAGAGCATT AGCTTGGCTT GAGCGAGAAA ACATTGTAAC TCAACAAGAA
TTATCTGGTA GTAAGGATGC ATTAAAATGG GCCGCAAGAA CTTATGTAGT TGCTGCAGTA
GGATCTTTAG CTACGCTACT ATATTTTATT AGTATTTACT TAGGTAGAGA CTAG
|
|---|
| Protein sequence | MLVSWYVSNK LKTKFKTYSK VHLQNGMSGA EIAERMLADH GITDVKVIST PGMLTDHYNP
SNKTVNLSEG VYSQRNAAAA AVSAHEVGHA VQHAKAYSWL TMRSKLVPMV SIASKYSQWV
IMGGLVLAAT TAFGNTLLLV GIIMFAMGTL FSFITLPVEY DASNRALAWL ERENIVTQQE
LSGSKDALKW AARTYVVAAV GSLATLLYFI SIYLGRD
|
|---|
| |