| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_02895 |
|---|
| Symbol | |
|---|
| ID | 9296065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | + |
|---|
| Start bp | 668404 |
|---|
| End bp | 669897 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | |
|---|
| Product | putative auxin-regulated protein |
|---|
| Protein accession | YP_003715344 |
|---|
| Protein GI | 298207165 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.380392 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCATTAA AATCTTTTGC AGCAAAAGTC TTTGCTCATT ATCACAGGAG AAAAATAGAT
CGTTGGGCAG CTAATCCTAT TAAAACACAA GAGCGTGTTT TAAGGGAATT AATTAATGGT
GCCAAAGACA CCAAATTTGG TAAGGATCAT AATTTTGTAA TTATTAAAGA CCATACAGAT
TTTGCTAAAT ATGTACCCGT AAGAGATTAT GAAGATCTTA AGCCTTATGT AGAAGAAGCT
GTAGCTGGAA AAGAGGATAT CTTATGGAAA GGTAAACCTC TTTATTTTGC AAAAACCTCT
GGTACCACAA GTGGATCAAA ATATATTCCT TTAACCAAGG AGTCTATGCC TGGTCATATA
AACGCTGCAA GAAATGCCAT ACTTTGTTAT ATAGCTGAAA CAAACAATGC AGATTTTGTC
GATGGAAAAA TGATTTTTCT GCAAGGAAGT CCCGAGCTAA ATGAGCAAAA CGGTATTAAG
TTGGGACGCC TATCTGGTAT TGTAGCCCAT TTTGTACCAA ACTACCTTCA AAAAAACAGA
ATGCCAAGTT GGGAAACCAA CTGTATAGAA GATTGGGAAA CAAAGGTAGA TGCTGTTGTA
GAGGAAACCA TTAATGAAGA CATGACTGTT ATTAGTGGTA TTCCGCCTTG GGTGCAAATG
TATTTTGAAC GTTTAAAGGA AAAAAGCGAT AAGGATATAA AAGACCTTTT TAAAAACTTT
AATCTTTTTA TTTATGGCGG CGTTAACTAT GAGCCGTATA AACCCATTTT TGAAAAGTTA
ATTGGGAAGA AAGTAAATAG TATTGAACTT TATCCAGCAT CTGAAGGTTT TTTTGCATTT
CAGGACAAAC AAGATGATAA TGGCATGTTG CTTCAGCTAG ATTCTGGTAT ATTCTATGAA
TTTATTGAAG CAGATAAATT TTTCGACAAA AACCCTAAAC GCCTTACATT AAAAGACATT
AAGTTAAATG TAAACTATGT TATGCTAATC TCTAGCAATG CAGGATTATG GGCTTATAAT
GTTGGAGATA CCGTTCAGTT TACTTCACTT AAACCATTTA AAGTAATAGT CTCCGGACGC
ATAAAACATT TTATTTCTGC GTTTGGCGAA CATGTGATTG CCAAAGAAGT TGAGGAGGCA
ATGAAAGATG CTTGTAGTTC TTACCAAGTC TCTATAAGTG AGTTTACTGT AGCACCTCAA
ATAGAACCAA AACAAGGACT ACCCTATCAC GAATGGTTTG TAGAGTTTGA AACAGAGCCA
AAAGATATAG CTGCATTTTC AAGCAGAATA GACCAGGCTT TACAACAGCA AAATTCTTAT
TACAAAGATT TAATAGATGG AAAAATTCTT AGACCACTAG AGATTTTTAA AGTAAAAAAG
AATGGCTTTA AGGAATATAT GAAAACTCAG GGCAAATTAG GCGGTCAAAA CAAACTGCCA
AGACTGTCTA ACGACCGTAA AATAGCAAAT AGCCTTTACG AATTGCAATC TTAA
|
|---|
| Protein sequence | MSLKSFAAKV FAHYHRRKID RWAANPIKTQ ERVLRELING AKDTKFGKDH NFVIIKDHTD
FAKYVPVRDY EDLKPYVEEA VAGKEDILWK GKPLYFAKTS GTTSGSKYIP LTKESMPGHI
NAARNAILCY IAETNNADFV DGKMIFLQGS PELNEQNGIK LGRLSGIVAH FVPNYLQKNR
MPSWETNCIE DWETKVDAVV EETINEDMTV ISGIPPWVQM YFERLKEKSD KDIKDLFKNF
NLFIYGGVNY EPYKPIFEKL IGKKVNSIEL YPASEGFFAF QDKQDDNGML LQLDSGIFYE
FIEADKFFDK NPKRLTLKDI KLNVNYVMLI SSNAGLWAYN VGDTVQFTSL KPFKVIVSGR
IKHFISAFGE HVIAKEVEEA MKDACSSYQV SISEFTVAPQ IEPKQGLPYH EWFVEFETEP
KDIAAFSSRI DQALQQQNSY YKDLIDGKIL RPLEIFKVKK NGFKEYMKTQ GKLGGQNKLP
RLSNDRKIAN SLYELQS
|
|---|
| |