Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CA2559_02440 |
Symbol | |
ID | 9295973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Croceibacter atlanticus HTCC2559 |
Kingdom | Bacteria |
Replicon accession | NC_014230 |
Strand | - |
Start bp | 575104 |
End bp | 576657 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | |
Product | probable piperideine-6-carboxylate dehydrogenase |
Protein accession | YP_003715254 |
Protein GI | 298207075 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.145685 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCAG TAGCAACTGA ATTCGGAATA GACGAAGCTT TAAAGCAATT AGGCATAAAT GAAGTTAATA ATGGTACATC TACAGGGTCA GATTGGTTTT CTTCTGGTGA AGAAATCTCT TCCTACTCTC CAGTAGACGG ACAATTAATA GCTAAAGTAA AAACAACAAC TAAAGACGAC TACGAAAAAG TTGTTACAAC AGCATCAAGC GCATTTAAAA CTTGGCGTAA AATGCCAGCT CCACAACGTG GTGAAGTTGT AAGACAATTT AATGAGGAGC TACGTCGTCT TAAAGAACCA TTAGGTAAGT TAGTATCTTA TGAAATGGGA AAATCTTACC AAGAAGGTTT GGGAGAAGTT CAGGAAATGA TCGATATCTG TGATTTTGCA GTAGGACTTT CCAGACAATT GCACGGTTTA ACAATGCATA GTGAGCGTCC AGGACACCGT ATGTATGAAC AATACCACCC ATTAGGAGTA GTTGGTATTA TCTCTGCATT TAATTTTCCA GTAGCTGTTT GGGCTTGGAA TACTGCTTTA GCTTGGGTTT GTGGAGATGT ATGTATTTGG AAACCTTCAG AAAAAACACC ATTAACAGGT GTAGCTTGTC AAAACATTGC ACAACGTGTA TTTAAAGAAA ATGGTTTACC AGAAGGTATC TCTTGCTTAA TTAATGGAGA TTATAAGGTT GGTGAATTTA TGACTACAGA TAAACGTGTG CCATTAATTT CTGCTACAGG ATCTACTAGA ATGGGTAAAA TTGTAGCATC TAAAGTAGGA GAACGTTTAG GGAAATCTTT ATTAGAATTA GGTGGTAACA ATGCAATTAT CGTAACACCA GATGCAGATA TTAAAATGAC TGTAATTGGT GCTGTGTTTG GCGCAGTAGG AACAGCAGGA CAGCGTTGTA CATCTACACG TCGTCTTATT ATTCACGATT CTATGTATGA TAAGGTGAAG AATGCTATTG TCGATGCTTA TGGACAATTA AAGATTGGAA ATCCTTTAGA TGAAACTAAT CACGTTGGTC CACTTATAGA TAAAGATGCA GTGGCTAACT ACAACAAAGC ACTTGAACGC GTAGTAGAAG AAGGCGGAAA AATTATTGTT GAAGGTGGTG TTTTAGAAGG TGAAGGTTAC GAAAGTGGAT GCTACGTAAA ACCAGCTATA GCTGAAGCTC AAAATGATTT TGAAATCGTA CAACACGAAA CCTTTGCGCC AGTGTTATAT TTAACAAAAT ATTCTGGTGA TATTGAAAAT GCTATCGATT TACAAAACAG TGTAAACCAA GGTTTGTCTT CTGCAATTAT GACAAATAAT TTACGTGAAG CAGAACACTT CTTATCTGTA GCAGGTAGTG ATTGTGGTAT TGCAAATGTA AATATTGGAA CATCTGGAGC AGAAATAGGT GGTGCCTTTG GTGGAGAGAA AGAAACTGGT GGTGGCCGCG AGAGTGGTAG TGATGCTTGG AAAGTATACA TGCGTCGCCA AACCAATACA ATTAACTACA CAACAGAACT TCCTTTAGCA CAAGGTATCA AGTTTGATCT GTAA
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Protein sequence | MSAVATEFGI DEALKQLGIN EVNNGTSTGS DWFSSGEEIS SYSPVDGQLI AKVKTTTKDD YEKVVTTASS AFKTWRKMPA PQRGEVVRQF NEELRRLKEP LGKLVSYEMG KSYQEGLGEV QEMIDICDFA VGLSRQLHGL TMHSERPGHR MYEQYHPLGV VGIISAFNFP VAVWAWNTAL AWVCGDVCIW KPSEKTPLTG VACQNIAQRV FKENGLPEGI SCLINGDYKV GEFMTTDKRV PLISATGSTR MGKIVASKVG ERLGKSLLEL GGNNAIIVTP DADIKMTVIG AVFGAVGTAG QRCTSTRRLI IHDSMYDKVK NAIVDAYGQL KIGNPLDETN HVGPLIDKDA VANYNKALER VVEEGGKIIV EGGVLEGEGY ESGCYVKPAI AEAQNDFEIV QHETFAPVLY LTKYSGDIEN AIDLQNSVNQ GLSSAIMTNN LREAEHFLSV AGSDCGIANV NIGTSGAEIG GAFGGEKETG GGRESGSDAW KVYMRRQTNT INYTTELPLA QGIKFDL
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