| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_00655 |
|---|
| Symbol | |
|---|
| ID | 9295611 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | - |
|---|
| Start bp | 160691 |
|---|
| End bp | 162145 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | |
|---|
| Product | putative plant auxin-regulated protein |
|---|
| Protein accession | YP_003714900 |
|---|
| Protein GI | 298206721 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTAT TTATAAAATA TCCTAATGAG GTGCAACATG AACTTTTACA CCAATTACTG
TATAAAGCAA AAGATACAGA AATGGGTAAA ACCTATGGTT TTGATACGAT TACAAATTAT
AAAACCTTTT CGGAGCGTGT TCCTATTCAA TCTTACGAAC AATATACTGA GCGCATAGAG
CGAAGCCGAA GCGGTGAAAA CAACATTTTC TGGCCAACAC CTATAAAGTG GTTTGCCAAA
TCCAGCGGTA CTACAAATGC CAAAAGTAAA TTTATTCCTG TAAGTGAAGA CTCTCTCGAA
GATTGCCACT ATGCAGGTAG TAAAGACTTG TTGTGCATGT ATCTTAATAA TAATCCTGAA
GCCAATTTGT TTACAGGAAA AAGTTTACGC CTAGGCGGAA GCAAAGATTT ATATAAAGAG
AATGGAACTG TTTATGGTGA TTTATCGGCT ATTTTAATAG ATAATATGCC TTTTTGGGCC
ACGTATAGTA GTACGCCGAG CAATGAAATT TCCTTAATGA GCGATTGGGA AACTAAGATG
CAGGCCATTG TAGATGAAAC CATTACGCAA AATGTAACTA GTCTAGCTGG AGTGCCAAGT
TGGATGTTAG TATTGCTAAA TAATGTACTC GAAACAACTG GCAAGTCTTG TATACATGAC
GTTTGGCCAA ATTTAGAGGT TTATTTTCAT GGCGGTGTAA GTTTTGAACC TTATCGCGAT
CAATACAAGG CAATTATGTC TTCTGAAAAA GTGAAGTATT ATGAAATATA TAATGCTTCT
GAAGGCTTTT TTGCAATTCA AGATAAAAAT GATAGTCGTG ATTTATTGTT GATGCTTGAC
TATGGTATTT TTTATGAATT TATACCAATG GATAGCTACG GTAGCGAAGA GGAAAGTGTT
ATTCCTTTAT CTGAAGTAGA GTTAAATAAA AATTACGCCA TTATAGTTAC CACTAATGGA
GGATTGTGGC GATATAAAAT TGGAGATACA ATTAGATTTA CAAGTTTAAG TCCTTATAGA
ATACGAGTTT CAGGACGTAC AAAGCATCAC ATAAATGTGT TTGGAGAAGA GCTTATTATT
GAAAATGCCG AAGAAGCATT AAGAAAGGCT TCACAGCAAA CAAATTGTGA GATAGTAGAT
TATACTGCAG GACCAATTTT TATGGAAGGT ACCGAAAAAG GCGCACACGA GTGGATTATA
GAATTTAAGA AAGCACCTGA AAGTATAGAG CAATTTCAAA AATGTTTAGA TGATAGTTTG
CAAACTATTA ATAGTGATTA TGAAGCTAAA CGTTATAATA ATATGACCTT AAATATGCTC
ACTGTTCACA AAGCTAAAGA CAAGTTGTTT TATGAATGGT TAAAGAAAAA CGACAAACTT
GGAGGACAAC ATAAAATTCC GCGATTATCT AATACTCGGG ATTATTTAGA TGAGTTATTG
AAAATGAATA TTTAA
|
|---|
| Protein sequence | MELFIKYPNE VQHELLHQLL YKAKDTEMGK TYGFDTITNY KTFSERVPIQ SYEQYTERIE
RSRSGENNIF WPTPIKWFAK SSGTTNAKSK FIPVSEDSLE DCHYAGSKDL LCMYLNNNPE
ANLFTGKSLR LGGSKDLYKE NGTVYGDLSA ILIDNMPFWA TYSSTPSNEI SLMSDWETKM
QAIVDETITQ NVTSLAGVPS WMLVLLNNVL ETTGKSCIHD VWPNLEVYFH GGVSFEPYRD
QYKAIMSSEK VKYYEIYNAS EGFFAIQDKN DSRDLLLMLD YGIFYEFIPM DSYGSEEESV
IPLSEVELNK NYAIIVTTNG GLWRYKIGDT IRFTSLSPYR IRVSGRTKHH INVFGEELII
ENAEEALRKA SQQTNCEIVD YTAGPIFMEG TEKGAHEWII EFKKAPESIE QFQKCLDDSL
QTINSDYEAK RYNNMTLNML TVHKAKDKLF YEWLKKNDKL GGQHKIPRLS NTRDYLDELL
KMNI
|
|---|
| |