| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C1323 |
|---|
| Symbol | |
|---|
| ID | 4010835 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | - |
|---|
| Start bp | 1393360 |
|---|
| End bp | 1394391 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637953910 |
|---|
| Product | allantoicase |
|---|
| Protein accession | YP_556530 |
|---|
| Protein GI | 91781323 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG4266] Allantoicase |
|---|
| TIGRFAM ID | [TIGR02961] allantoicase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.123244 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCTAC CCAGTCCCGA TCCCGGCGCT CCTGCCTTTA CGCGCACCGG CATCAACCTC
GCGGACCCGC GCCTCGGTGC CGAGGCCGTG CTCACCAGCG ACGACTTCTT TGCGCCGATG
GCGCGCATGC TCGATCCCAA TCCGGCCGTT TTCATCGCTG GCAAATACGA CGACAACGGT
AAATGGATGG ACGGTTGGGA ATCGCGCCGC AAGCGCGTGG CGGGCCACGA TTTCTGTATC
GTTAAGTTGG GCGTGGCAGG CGAACTGATG GGCGTCGATA TCGACACCAG TTATTTCACC
GGCAACTTTC CGCCGGCCGC GTCGATCGAC GCTTGCCGTT GCGACGACGA TATTCCGGGC
GCCCATTCGC CATGGACTGA AGTGCTGCCG GCGACCGCAC TAAACGGCAA TGCGCATCAC
TATCGCGCAA TCGACGCAGC CACCCGCGAC ATCTATACGC ACGTGCGCCT GAACATCTAT
CCAGATGGCG GTGTCGCCCG CTTGCGCGTG TACGGCCGTC CTCGCCGGGA CTTGTCGCCA
GGCGTCGAAC TCGATCTCGC GTCCGCTACG AACGGTGCGC GAATCGTCGC CGCGAACAAT
GAGCATTACG GGGCTGCTTC GAACCTGCTG TTGCCAACGC GTGCCGCCAA CATGGGCGAA
GGCTGGGAGA CCCGCCGGCG CCGCGAACCA GGCTGCGACT GGTGCATCAT CGAGTTGGCG
ACGCCCGGCG AAATAAGTCA GATCAGCGTC GACACCGCGC ATTTCAAGGG GAATTTTGCA
GACCGCTGCT CGCTACAAGG CGCGTGGGTC AGGGCCGGAA CGGACGAGTC CCTGATCACG
CAATCGATTT TCTGGCCGGT GTTGCTTGAC GAGCAAAAGC TGGAGATGGG CAGAGTTCAT
ACCTTTGTGC CGACCCAGAG CATGCCTGTT ACACATGTGC GCTTCAATAT ATTGCCGGAT
GGTGGCGTCT CGCGGCTGAG ACTAATCGGC CGGACCTCGA CTTGTTCCAA AGCAAGCCTT
CAACCCGATT AA
|
|---|
| Protein sequence | MALPSPDPGA PAFTRTGINL ADPRLGAEAV LTSDDFFAPM ARMLDPNPAV FIAGKYDDNG
KWMDGWESRR KRVAGHDFCI VKLGVAGELM GVDIDTSYFT GNFPPAASID ACRCDDDIPG
AHSPWTEVLP ATALNGNAHH YRAIDAATRD IYTHVRLNIY PDGGVARLRV YGRPRRDLSP
GVELDLASAT NGARIVAANN EHYGAASNLL LPTRAANMGE GWETRRRREP GCDWCIIELA
TPGEISQISV DTAHFKGNFA DRCSLQGAWV RAGTDESLIT QSIFWPVLLD EQKLEMGRVH
TFVPTQSMPV THVRFNILPD GGVSRLRLIG RTSTCSKASL QPD
|
|---|
| |