| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C1284 |
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| Symbol | |
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| ID | 4010796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007953 |
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| Strand | + |
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| Start bp | 1351778 |
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| End bp | 1353685 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637953874 |
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| Product | thiamine pyrophosphate protein |
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| Protein accession | YP_556494 |
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| Protein GI | 91781287 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.283585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.383394 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTGC GCCGCCCCCT TCCTGTCGCG AAGGTGGCTT ACAACCCGGT TGCGTCCGCG
CAGATCGCTC TGCAATGCAT CGGCCGGCTG GGCTATTCCG TGGAGAATGC AATGAGTCAA
ACCGTGGGTG ACTTTATTAT CGATCGGCTG CATGCGTGGG GTGTGCGGCG AATTTACGGC
TATCCGGGCG ACGGCATCAA CGGCGTCTTC GGCGCGCTGA ATCGCGCCCA CGGCAAGATC
GAATTCGTGC AGGTGCGCCA TGAAGAAATG GCTGCATTCA TGGCCTCGGC GCACGCGAAA
TTCACCGGCG AGCTCGGCGT TTGCATCGCA ACCTCAGGGC CGGGCGCATC GCATCTGCTC
ACCGGCCTCT ACGATGCCCG GCTCGATCAC ATGCCGGTAC TCGCCATTGC CGGACAACAG
GCCCGCGCGG CGCTCGGCGG CCATTACCAG CAGGAGCTGG ATCTGGTGTC GATGTTCAAG
GACGTAGCCG GCGCGTTCGT GGAGCAGGCT AGCGTGCCCT CCCAGGTCCG TCATCTGGTC
GACCGCGCGG TGCGCACGGC GCTCGCCGAA CGCAAGGTCA CGGCTCTCGT GTTGCCCAAC
GATCTGCAGG ATCTTGCGTA CGAAGCACCG GCGCGCAAGC ACGGCACGCT GCATTCGGGG
GTCGGCTACC GGCGGCCCCG CCTCGTGCCC TATCCGGACG ATCTGCAACA GGCCGCGGAA
GTGCTCAACG CCGGCAAGCG GGTCGCGATT CTGGTCGGCG CGGGCGCGCT GCATGCCACC
GACGAAGTGA TCGCCGTCGC CGACAAGCTC GGCGCGGGCG CTGCCAAGGC CTTGCTCGGA
AAAGCGGCGT TGCCGGACGA TTTGCCGTGG GTGACCGGGT CGATCGGGCT GCTCGGCACC
AAACCCAGTT ACGACCTGAT GACCGAGTGC GACACCCTGC TGGTGATCGG CTCGGGTTTC
CCGTACGCCG AATTCCTGCC CAAGGAGGGC GCCGCTCGCG GCGTGCAGAT CGACCTCAAG
GCCGACATGC TCAGCCTGCG CTATCCGATG GAAGTCAACC TGGTGGGCGA CAGCGTCGAG
ACGCTACGCG CGCTGCTGCC GTTGCTCGAA CAGAAGCAGG ACCGCGGATG GCGTGAAAAG
ATCGAAGGTT GGACTGCCGA CTGGTGGAAG ACACTCGACA AACGCGCCCA CGAAGCAGGC
AGGAAGGGGA TGAATCCCCA GCGCAGCGTA TGGGAACTGT CGCCTCGCCT GCCTGCCAAT
GCCATCGTTA CAAGCGATTC CGGATCATGC GCGAACTGGT ACGCGCGCGA CCTGAAAGTG
CAGCGCGGGA TGATGTGCTC GCTGTCCGGC GGTCTCGCCT CGATGGGGGC GGCGGTGCCG
TACGCGATAG CCGCGAAATT CTCCCACCCC GAGCGCCCGG TGATCGCGCT GGTGGGCGAC
GGCGCGATGC AGATGAACAA CATGGCGGAG CTGATCACCG TGGCCAAGTA CTGGAAGCAG
TGGGCCAGTC CACGCTGGAT CTGCATGGTG CTCAACAATA GCGACCTGAA CCAGGTGACG
TGGGAGCAAC GGGTAATGGA AGGCGATCCG AAGTTCGAGG CATCGCAGGA CATTCCGTCC
GTGCCCTATC ACCGTTTTGC GGAGCTGATC GGCCTGAAGG GCATCTACGT CGAGGACCCG
GAGCGCATGG GAGCGGCCTG GGACGAAGCG CTCGCGGCAG ACCGTCCCGT GGTCATTGAA
GTGAAGGCCG ATCCGGACAT TCCGCCACTG CCGCCGCATA TCACGTTGGC GCAAGCCAAA
GCCTTCGCGT CGACGCTGAT CAAGCGCGAT CCGAACGAAG GCAGCGTGAT CATCGAAACC
GCCAAACAGG TGCTCGGCGC GGTGCTGCCG GGGCATCGCG ACAAATGA
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| Protein sequence | MRLRRPLPVA KVAYNPVASA QIALQCIGRL GYSVENAMSQ TVGDFIIDRL HAWGVRRIYG
YPGDGINGVF GALNRAHGKI EFVQVRHEEM AAFMASAHAK FTGELGVCIA TSGPGASHLL
TGLYDARLDH MPVLAIAGQQ ARAALGGHYQ QELDLVSMFK DVAGAFVEQA SVPSQVRHLV
DRAVRTALAE RKVTALVLPN DLQDLAYEAP ARKHGTLHSG VGYRRPRLVP YPDDLQQAAE
VLNAGKRVAI LVGAGALHAT DEVIAVADKL GAGAAKALLG KAALPDDLPW VTGSIGLLGT
KPSYDLMTEC DTLLVIGSGF PYAEFLPKEG AARGVQIDLK ADMLSLRYPM EVNLVGDSVE
TLRALLPLLE QKQDRGWREK IEGWTADWWK TLDKRAHEAG RKGMNPQRSV WELSPRLPAN
AIVTSDSGSC ANWYARDLKV QRGMMCSLSG GLASMGAAVP YAIAAKFSHP ERPVIALVGD
GAMQMNNMAE LITVAKYWKQ WASPRWICMV LNNSDLNQVT WEQRVMEGDP KFEASQDIPS
VPYHRFAELI GLKGIYVEDP ERMGAAWDEA LAADRPVVIE VKADPDIPPL PPHITLAQAK
AFASTLIKRD PNEGSVIIET AKQVLGAVLP GHRDK
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