| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C1272 |
|---|
| Symbol | |
|---|
| ID | 4010784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | - |
|---|
| Start bp | 1330962 |
|---|
| End bp | 1331924 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637953862 |
|---|
| Product | putative ribokinase |
|---|
| Protein accession | YP_556482 |
|---|
| Protein GI | 91781275 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0524] Sugar kinases, ribokinase family |
|---|
| TIGRFAM ID | [TIGR02152] ribokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0725613 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACGG CTCGTCAAGC CAATGGACGT GTCGTCGTTC TGGGCATCTA CGTGACGGAT
CTGACGTTCC GCGCGCAGCG TATGCCGCTG ATCGGCGAGA CGATCGCGGG TTCCGCGTTT
GCGATGGGGC CCGGCGGCAA GGGCTCGAAT CAGGCGGTCG CCGCCGCGCG CGCGGGCGCC
GACGTGGTGT TCTGCACGCG TCTCGGTAAC GACGCGTTTG GCGAGATCGC CCGCGCGACA
TGGGCGGCGG AAGGCATCAC GGCGCGCGCG CCGGTGGCCG ACGGCCACGC CACGGGCGCC
GCGCATATCT TCGTCGACGA CACCAGCGGC ATGAATGCGA TCATCGTCGC AGCCGGCGCG
GCCGGCACGC TGAGCGCGGC CGATGTCGAT GCGATCGAGG CCGACATTGC CGCGGCGCGC
GTGTTCGTCA CGCAACTCGA ACAGCCGCTC GCCGCCGCGC GCCGCGGCCT CGAAGTGGCG
CGCCGGCACG GCGTCGTCAC GGTATTCAAT CCGGCGCCCG CACTGCCGCT CGACGACGGC
ATCTTCCCGC TGTGCGACTA CCTCACCCCG AACGAAACCG AGGCCACCGC GCTCACCGGC
GTGCCGATCG CCAATCCCGA CGACGCGCGC CGCGCCGCCG ACGCGCTGCT GGCCAAAGGG
GTCGGCACGG TGATCGTGAC GCTCGGCGAG GGCGGCGCGC TGCTGCATTC GGCGACGCAA
TCGGTGCTGG TGCCGGCTTA CCACTGTGGC CGCGTGGTCG AAACGGCCGG CGCGGGTGAC
GGCTTCACCG GCGGCTTCGC GGCGGCGCTC GCGCGCGGCG ACGATGCGCT TGCGGCAATG
CACTTCGGCT GTGCGCTCGC GGGGATTTCG GTGACGCGCG CCGGCACCGC GCCGTCGATG
CCGACGCTTG CCGAAGTGAA CCGGGTGCTG AACGCGGCGG CCCGGACGGC GCACGCCTCC
TGA
|
|---|
| Protein sequence | MNTARQANGR VVVLGIYVTD LTFRAQRMPL IGETIAGSAF AMGPGGKGSN QAVAAARAGA
DVVFCTRLGN DAFGEIARAT WAAEGITARA PVADGHATGA AHIFVDDTSG MNAIIVAAGA
AGTLSAADVD AIEADIAAAR VFVTQLEQPL AAARRGLEVA RRHGVVTVFN PAPALPLDDG
IFPLCDYLTP NETEATALTG VPIANPDDAR RAADALLAKG VGTVIVTLGE GGALLHSATQ
SVLVPAYHCG RVVETAGAGD GFTGGFAAAL ARGDDALAAM HFGCALAGIS VTRAGTAPSM
PTLAEVNRVL NAAARTAHAS
|
|---|
| |