Gene Bxe_C1185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C1185 
Symbol 
ID4010697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp1243198 
End bp1243755 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content61% 
IMG OID637953777 
ProductOmpW family outer membrane porin 
Protein accessionYP_556397 
Protein GI91781190 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.193621 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCATT GGCGTCGGAG CCGTCCACCT GAAGTTCCAC CCCTCGGCGG ATGTCTCGTT 
CGCTGGCAAC CGGGTGGCGC GGTGACGGTG GGCAGCGACA CCGTGCTGGG CGTGGAAATC
GGATACGCCG TAACGCCCAA CTGGACGGCC CGGCTGGATG TCGGTTCGCC GGTGGAAACC
GATTTAGGCG GCGCTGGAAC CTTGAGCCCG TTGGGAAAAT TGGGCAGTGT CAAAGGTGGC
CCGGCCATTT TGACAATGAC GTATTCGCCA GGCATGCTGG GGCCGATCCG ACCGTTTTTC
GGCGGCGGTC TGACCTATCT GAGGGTTTTC AGCACCAAAG ATGGCGCCGT GCAGAACCTC
AAGGTTGACG ATGGGCTCGG TACGGCACTA ACGATCGGCG CGGACTGGCC CCTGTCGGAT
GGCTACAGCA TCGGCTTCTC GGTTCAGAAG CTGTTTTTGA AAGTCAAGGC CACGGGGACT
GCCGGTGGCG CGCCGGTTCG TGCCGATGTC AAACTGGATC CGGTGTTGAC TTTCCTGTCG
CTTCGCAAGC AGTTTTGA
 
Protein sequence
MVHWRRSRPP EVPPLGGCLV RWQPGGAVTV GSDTVLGVEI GYAVTPNWTA RLDVGSPVET 
DLGGAGTLSP LGKLGSVKGG PAILTMTYSP GMLGPIRPFF GGGLTYLRVF STKDGAVQNL
KVDDGLGTAL TIGADWPLSD GYSIGFSVQK LFLKVKATGT AGGAPVRADV KLDPVLTFLS
LRKQF