Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_C1185 |
Symbol | |
ID | 4010697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007953 |
Strand | - |
Start bp | 1243198 |
End bp | 1243755 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637953777 |
Product | OmpW family outer membrane porin |
Protein accession | YP_556397 |
Protein GI | 91781190 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.193621 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCCATT GGCGTCGGAG CCGTCCACCT GAAGTTCCAC CCCTCGGCGG ATGTCTCGTT CGCTGGCAAC CGGGTGGCGC GGTGACGGTG GGCAGCGACA CCGTGCTGGG CGTGGAAATC GGATACGCCG TAACGCCCAA CTGGACGGCC CGGCTGGATG TCGGTTCGCC GGTGGAAACC GATTTAGGCG GCGCTGGAAC CTTGAGCCCG TTGGGAAAAT TGGGCAGTGT CAAAGGTGGC CCGGCCATTT TGACAATGAC GTATTCGCCA GGCATGCTGG GGCCGATCCG ACCGTTTTTC GGCGGCGGTC TGACCTATCT GAGGGTTTTC AGCACCAAAG ATGGCGCCGT GCAGAACCTC AAGGTTGACG ATGGGCTCGG TACGGCACTA ACGATCGGCG CGGACTGGCC CCTGTCGGAT GGCTACAGCA TCGGCTTCTC GGTTCAGAAG CTGTTTTTGA AAGTCAAGGC CACGGGGACT GCCGGTGGCG CGCCGGTTCG TGCCGATGTC AAACTGGATC CGGTGTTGAC TTTCCTGTCG CTTCGCAAGC AGTTTTGA
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Protein sequence | MVHWRRSRPP EVPPLGGCLV RWQPGGAVTV GSDTVLGVEI GYAVTPNWTA RLDVGSPVET DLGGAGTLSP LGKLGSVKGG PAILTMTYSP GMLGPIRPFF GGGLTYLRVF STKDGAVQNL KVDDGLGTAL TIGADWPLSD GYSIGFSVQK LFLKVKATGT AGGAPVRADV KLDPVLTFLS LRKQF
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