Gene Bxe_C1109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C1109 
Symbol 
ID4010621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp1156045 
End bp1156680 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content66% 
IMG OID637953705 
Productputative aromatic acid decarboxylase 
Protein accessionYP_556325 
Protein GI91781118 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase 
TIGRFAM ID[TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGC GGATGGCCGC TCACGATGAC GGCACGCGCA AACCACAACG CCGCGTCGTC 
GTCGCGATCT CGGGCGCGAC CGGCGCGATC TATGGCGTGC GGCTGCTGCA AGCGCTGCGC
GCATGCAGTG TGACCACGCA CCTGGTCGTG TCGCGGGCGG GCTGGATGAC CGTCGCCGAC
GAAACGGGTT TCGACCGTGC CGCGCTGCGC GACGCAGCCG ACGTCTACCA CGACCAGAAC
GAAGTGGGCG CCAGCATTGC AAGCGGCTCG TTCCAGCACG ACGGTATGGT GATTGCACCG
TGTTCGATGA AAACGCTGGC CGCTGTCGCG CATGGCTTCG ACGACAATCT CGTCGCGCGT
GCGGCAAGCG TCACGCTAAA GGAGCGGCGC AAGCTCGTGC TGCTGGCACG CGAAACACCG
CTGACGCTCG CGCATCTGCG CAACATGACG CTGGCAACCG AGATGGGCGC AGTCGTCATG
CCGCCGCTGC CCGCGTTCTA CGCGAAACCG GATAGCATCG ACGCGATGGT CGATTACACG
GTGATGCGGG TGCTCGACCA GTTGCGCATC GCGTCGGACA AACCGTATGC GCGCTGGCAG
GGACTCGCGG CATCGCCCGC GAGTTTCGCG CGATGA
 
Protein sequence
MNARMAAHDD GTRKPQRRVV VAISGATGAI YGVRLLQALR ACSVTTHLVV SRAGWMTVAD 
ETGFDRAALR DAADVYHDQN EVGASIASGS FQHDGMVIAP CSMKTLAAVA HGFDDNLVAR
AASVTLKERR KLVLLARETP LTLAHLRNMT LATEMGAVVM PPLPAFYAKP DSIDAMVDYT
VMRVLDQLRI ASDKPYARWQ GLAASPASFA R