| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C1031 |
|---|
| Symbol | |
|---|
| ID | 4010544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | - |
|---|
| Start bp | 1068045 |
|---|
| End bp | 1069571 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637953631 |
|---|
| Product | 3-hydroxy-acyl-CoA dehydrogenase |
|---|
| Protein accession | YP_556251 |
|---|
| Protein GI | 91781044 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0248781 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAAG ACTTCACTAT CCGTTCGGTC GGCATTGTCG GCTCCGGTGC GATGGGCCGG
GGAATCGCGC AGATTGCCGC GCTCGCGGGA CTGAACGTAC ACCTGTACGA CATCAGGCAG
GACGCCGTGG AGGCCGCCCG ACACCATCTC CGCGATACGT TCGCGACGCT TGCGACGAAA
GGCAAGATTG CGGTCAACGC GGCAACCGAC GCGGTGGCAC GCATCCGGTC CGCGACTTCG
GTGGACGCGT TGAAGAATTG CGACCTCGTG ATCGAGGCGA TCGCCGAGAA TCTCGACGCG
AAGCGGGATC TATTTACCCG GCTCGACGCG GTGGTTCGGG AGGACTGCAT CCTCGCGTCG
AATACCTCGT CGCTGTCGAT CACCGCGATC TCGACCGCGT GTTCGAAACC GTCGCGCGTC
GCGGGATTCC ACTTCTTCAA TCCCGTTCCG CTGATGAAAG TCGCCGAGGT CATCGACGGT
CTGCATGGCG TGCGGGAGAC CGGTGATCGC CTGATGGAGC TGGCGCGGCG GATGGGACAT
ACGCCGGTGC GGGTGAAGGA CATGCCCGGC TTTATCGTCA ACCACGCGGG GCGCGGAATG
AACACCGAGG GCCTGCGTAT CGTGAGCGAA GGGGTGGCGG ACTTCGTCGA TATCGACCGT
ATCGTGCGCG AGCAGGCCGG CTTCCGCCTG GGGCCATTCG AACTGATGGA CCTCACGTCC
CTCGATGTAT CGCATCCTGT CATGGAGTCG ATATACCACC AGTTCTATGA GGAGCCTCGC
TTCCGTCCAT CGCCGGTCAC CGCGGTCCGG CTCGCGGGCG GCCTTGTCGG GAGGAAGGCC
GGCGAAGGCT TCTACCGATA CCCTGGCGGC AGGAAGGAGA TCCCGGACGA GGGGCTCGTT
CATGCCGCGT TGCCCGAACG CGTATGGATC AGTTCGCGTT CAATCGACGC GCACCGGCAG
GTCACCGATC TGGTAGCGCC GACCGGTGTA ACGATCGAGT CGGGCGAGCG ACCGTCGGAA
AGCGCATTGA TCCTCGTGAT GCCGTATGGC AAGGACGCCA CCACCGCCGC GCTCGAAGAA
GGGCTGGACG CGAGCCGGGT TGTGGCGATC GATTGCCTGT TCCCGCTTAG CGCATCGCGC
CGTCGCACGC TGATGACCAC GCCGCTGACG AATCCGAGCT TTCGCGACGG CGCGCGCGCG
CTCTGCTCGC ACGGCGGTGC CGCCGTGACC GTTATTCGCG ACTCGGCGGG ATTCGTTGCA
CAGCGGATCG TCGCGATGAT CGTCAACATC GGTTGCGATA TCGCGCAGCA GAGAATCGCG
TCGCCCGACG ATATCGATCT CGCCGTGACG CTCGGTCTCG GCTATCCGAA CGGACCGCTC
GCGATGGGCG ACGCTGTCGG CGCGGCGAGG ATTCTGGAGA TTCTGCGCAA CATGACCGCG
CTGCTCGGCG ATCCGCGATA CCGACCCTCG CCGTGGTTGG CGCGGCGGGC GCAACTGGGA
ATGTCCTTGA CCCAGGCGGA TGACTGA
|
|---|
| Protein sequence | MTEDFTIRSV GIVGSGAMGR GIAQIAALAG LNVHLYDIRQ DAVEAARHHL RDTFATLATK
GKIAVNAATD AVARIRSATS VDALKNCDLV IEAIAENLDA KRDLFTRLDA VVREDCILAS
NTSSLSITAI STACSKPSRV AGFHFFNPVP LMKVAEVIDG LHGVRETGDR LMELARRMGH
TPVRVKDMPG FIVNHAGRGM NTEGLRIVSE GVADFVDIDR IVREQAGFRL GPFELMDLTS
LDVSHPVMES IYHQFYEEPR FRPSPVTAVR LAGGLVGRKA GEGFYRYPGG RKEIPDEGLV
HAALPERVWI SSRSIDAHRQ VTDLVAPTGV TIESGERPSE SALILVMPYG KDATTAALEE
GLDASRVVAI DCLFPLSASR RRTLMTTPLT NPSFRDGARA LCSHGGAAVT VIRDSAGFVA
QRIVAMIVNI GCDIAQQRIA SPDDIDLAVT LGLGYPNGPL AMGDAVGAAR ILEILRNMTA
LLGDPRYRPS PWLARRAQLG MSLTQADD
|
|---|
| |