| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0972 |
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| Symbol | |
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| ID | 4010485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007953 |
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| Strand | - |
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| Start bp | 1004652 |
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| End bp | 1005458 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637953576 |
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| Product | putative short-chain dehydrogenase/reductase |
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| Protein accession | YP_556196 |
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| Protein GI | 91780989 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.000126906 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCAG CAGGAAGATT GCAGGGAAAG GTCGCGCTTG TCACGGGTGC CGGATGCATC
GGCCCGGGTT GGGGCAACGG ACGCGCGATC GCCGTTCGCT TTGCCGAGGA AGGCGCGCAT
GTGATTGCCG TTGATCGTGA CCTGGCCTCG ATGGACGCGA CGCTCGAACT CGTCCGCGCT
GCGGGCGGGA GCGTAACGCC CTGCCTGTGC GACGTGACTG ACAGTGCGTC GGTCGAGCGC
CTCGTCGCCG ACAGCGTGGC ACGCTGCGGA CGCGTCGATA TCCTCGTGAA CAATGTCGGC
GCTCCGTCGC CGGGCGGACC GGTTGCGCTT GACGAGGCGC AGTGGGCGAT GCAACTCGAA
CTGAATCTGA CGACGGCATT CCTGATGTGC AAATACGTGC TGCCGGTGAT GGAACAGCAG
GGCGGCGGCG CGATCGTCAA TATCGCCTCC ACCTCGGGCA TCCGCTGGAC GGGCGCGGCG
CAGGTCGGCT ATGCCGCCGC GAAGGCCGGC ATGATCCAGA TGGGCCGCGT CGTGGCCGTC
GAATATGCGG CGAAGAACGT TCGTGTCAAT TCGGTAGTGC CCGGTCTGCT GCATACGCCA
ATGGTCGATA CGAAGATCGC ACACAACCAG GCCGGCGGCG ATGTCGAGTT GCTGCTCAGG
AAGCGCCAGG CGCGCATTCC AATGCCTTTC ATGGGAGACG GCCGCGACAC GGCCAATGCG
GCGCTCTTTC TTGCATCGGA TGAAGCGCGT TTTGTTACCG GCACCGAAAT CGTGGTCGAC
GGCGGGATGA GCGCCCGCTG CGATTGA
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| Protein sequence | MSSAGRLQGK VALVTGAGCI GPGWGNGRAI AVRFAEEGAH VIAVDRDLAS MDATLELVRA
AGGSVTPCLC DVTDSASVER LVADSVARCG RVDILVNNVG APSPGGPVAL DEAQWAMQLE
LNLTTAFLMC KYVLPVMEQQ GGGAIVNIAS TSGIRWTGAA QVGYAAAKAG MIQMGRVVAV
EYAAKNVRVN SVVPGLLHTP MVDTKIAHNQ AGGDVELLLR KRQARIPMPF MGDGRDTANA
ALFLASDEAR FVTGTEIVVD GGMSARCD
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