| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0516 |
|---|
| Symbol | |
|---|
| ID | 4010030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | + |
|---|
| Start bp | 530779 |
|---|
| End bp | 532350 |
|---|
| Gene Length | 1572 bp |
|---|
| Protein Length | 523 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637953147 |
|---|
| Product | putative AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_555767 |
|---|
| Protein GI | 91780560 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGCA TTCTAGACCA GCCCGACATC CTGTTTCCGG ACGTAATCCG CCACAATGCC
AGATTCCACG GTATCAAAAC GGCTGTCGTC TGCGGCGACG ATCGCCTGAA CTGGCGTGAG
TTTCACCTTC GTACGAACAA GGTCGCCAAT GCACTCGTGC GAGCCGGACT TCAGAAAGGG
GACCGCGTAT GCTTCTTCAT GCAGAACTCC ATGGCGGCCT TCGAGTTGAT CTGGGGCACG
ATTAAGGCCG GAGGCGTGGT CTCGCCACTG AATGTCATGA TGGCCGCTGA TTCGCTACCG
GCCATGATCG ATAACGCTGC GCCGCGTTTC ATATTCGTCG ACAGCGAGCT CGCTGGCGCG
GTCGATGCAG TCCGGGGCGC CGTGCGGAAT AAGCCGGATA TTTTTTACGC GGAGTCTGGC
GCGGTTGAGG GCTGGCAATC ATACGTCGAA CTGGTTGAGG CCGGTTCCGA GGCGGAGTAC
TTTCCGGATC TGAAGCTGTC CGATACGATG ACGGTGCTCT ACAGTTCCGG GACCACTGGT
GTTCCGAAAG GCAGCGAGCA TACGCACGCA GCGCGCCACT TCTATTCGCT CGGCTGCGGT
CCTGCCCTGC GAATGGATCC TTACAGCGTG GCGCTCTGCG CAACTCCGCT GTACACAAAT
GGAACCTGGA TCACCCTCCT TCCAGCGCTG TACCTCGGCG GCACAGTAGT TCTCGCCCGC
AAGCTGACGC CTCAAGCCTG GCTGGAACTG GTGGCGCGCG AGCGGATCAC CCATGCATTC
CTGGTTCCCA CTCAGTGCAT CGGGATCGTG GAGCGTGCGT CACCCGAATA TGACGTTTCA
TCGCTGCAGG GAATTCTTTA TGGTGGTGCG CCGATGACCA GCCAGACAGC GGCGGCCATG
GCGAAGACCT TCCCGAACAC CCGCATGTAC GAGATCTACG GGATGTCCGA GGGGTGGTGC
ACGCTCGCAT ATCCTGAGGA TCGCGCGCAC GGCAGGAGTT CCACCGTGGG CAAACCGGTG
TTCGGAGGCG ATATTTGCGT CATCGATCCA GAAGGCAGGG AACTGCCACC CGGAGAGCAA
GGCGAACTTG CCGGCTGGAG CGCTGGGCTT ATGAAGGGAT ATCTTGGCGA CCCGCAGCGC
ACCGCAGATA TCGTCTGGAA GGGCCCGCAT GGGCGCACTT ATCTGCGAAG CGGCGATATC
GGATACATGG ACACGGAAGG GTTCTTCTTC GTGAACGGCC GAGTGAAAGA CATGATCATC
TCTGGCGGCA TCAACGTGTT TGCATCGGAT ATTGAGGAGG TCTTCATGCA GCACCCCGCG
GTGGCCGAAG CTGCGGCCAT CGGGATTCCG CATGACAAAT GGGGTGAAAC CCCGATCGTT
ATGGTTATCC TGCGGCAGGG CCATCAGATC GATGCAGTTG CACTCAAGGA GTGGGGCAAC
CATCGCCTCG GTAAGTTCCA GCGAGTGAGC GAGGTGAAAT TCGTTGATGA TTTTCCACGG
GCCAATTACG GCAAAATTCT CAAGCGGGTG CTGCGCGAGC CATACTGGGA AGGGCGCGAG
CGGAGTATTT GA
|
|---|
| Protein sequence | MTSILDQPDI LFPDVIRHNA RFHGIKTAVV CGDDRLNWRE FHLRTNKVAN ALVRAGLQKG
DRVCFFMQNS MAAFELIWGT IKAGGVVSPL NVMMAADSLP AMIDNAAPRF IFVDSELAGA
VDAVRGAVRN KPDIFYAESG AVEGWQSYVE LVEAGSEAEY FPDLKLSDTM TVLYSSGTTG
VPKGSEHTHA ARHFYSLGCG PALRMDPYSV ALCATPLYTN GTWITLLPAL YLGGTVVLAR
KLTPQAWLEL VARERITHAF LVPTQCIGIV ERASPEYDVS SLQGILYGGA PMTSQTAAAM
AKTFPNTRMY EIYGMSEGWC TLAYPEDRAH GRSSTVGKPV FGGDICVIDP EGRELPPGEQ
GELAGWSAGL MKGYLGDPQR TADIVWKGPH GRTYLRSGDI GYMDTEGFFF VNGRVKDMII
SGGINVFASD IEEVFMQHPA VAEAAAIGIP HDKWGETPIV MVILRQGHQI DAVALKEWGN
HRLGKFQRVS EVKFVDDFPR ANYGKILKRV LREPYWEGRE RSI
|
|---|
| |