| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0388 |
|---|
| Symbol | |
|---|
| ID | 4009902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | + |
|---|
| Start bp | 410022 |
|---|
| End bp | 410963 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637953025 |
|---|
| Product | polar amino acid ABC transporter periplasmic ligand-binding protein |
|---|
| Protein accession | YP_555645 |
|---|
| Protein GI | 91780438 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.226989 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.56756 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCATA GCCGGAATAT CCTGTCGGCA GTGGCCGGAA CGTTGGCCGC ATTGGCGATG
GGTATAGTGG GCACGGCGCT GGCGGCAACC ACATTCAATC TGAGTCCGGA CCAGCATGAC
CGCGTCCGGA CCACGCCTGA TGCTGCAGCA ATCAAAGCCG TACCTCCATC GTTTCCGTTT
GTCGGAAAGG ACGAACTGGT TATCGGCATG ACAGTGGGGG CGCCGCCGCT TGCTGCGTAC
GCGACCGATG AGAAGACGGT GGTCGGTTTC GACCCGGACC TCGCACAACT GGTAGCTGAT
GGTTTGGGGC GCAAGCTGAA AATCGTGGTG CTCGCGTGGG AGGACTGGCC GCTCGCTCTG
CAATCGGGCA GGGTGGACGC GATTTTGTCG AACGTGACTG TTACTGAGGA GCGCAAGGAG
AAATTCGACT TTTCGACCTA TCGGCGTGAC GTGCTCGGTT TCTACGTGGC CAACTCAAGC
CCGATTAAGG CAATCCGTGA GCCGAAGGAC GTCGCCGGGC TACGTGTCAT TACCGATTCA
GGAACGAACC AGGAAAAGAT CCTGCTCGAA TGGAACAAGG AAAACGTTGC GCGCGGGCTG
AAGTCGGTGC AGGTTCAGTA TTATGACGAT CTCGCCGTGA GGGATGTGGC GCTGCGCTCG
GGGCGTGCTG ACGCAATCCT CAGCGTCAAC TCGTTTCTCG CCTACGAGGC CGCGCAGAGA
GGGGAGGTGC GCGCAGTCGG CACCATCAGC GGCGGTTGGC CGATTCTGGC AGACGTCGCG
ATCACGACGC GCAAGGGTAG TGGATTTGCT GCGCCACTCA CGCTGCTGCT GAACGACCTC
ATTCGCAGCG GGAAATACAC CCAGGTACTT GACCGCTGGA ATCTAGGTTC CGAAGCGATC
GATACGGCGA AGACGAATCC TCCAGGGCTA CCCAAAAGCT AA
|
|---|
| Protein sequence | MKHSRNILSA VAGTLAALAM GIVGTALAAT TFNLSPDQHD RVRTTPDAAA IKAVPPSFPF
VGKDELVIGM TVGAPPLAAY ATDEKTVVGF DPDLAQLVAD GLGRKLKIVV LAWEDWPLAL
QSGRVDAILS NVTVTEERKE KFDFSTYRRD VLGFYVANSS PIKAIREPKD VAGLRVITDS
GTNQEKILLE WNKENVARGL KSVQVQYYDD LAVRDVALRS GRADAILSVN SFLAYEAAQR
GEVRAVGTIS GGWPILADVA ITTRKGSGFA APLTLLLNDL IRSGKYTQVL DRWNLGSEAI
DTAKTNPPGL PKS
|
|---|
| |