Gene Bxe_C0371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0371 
Symbol 
ID4009885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp396482 
End bp397150 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content67% 
IMG OID637953008 
ProductABC heme exporter, inner membrane subunit CcmB 
Protein accessionYP_555628 
Protein GI91780421 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component 
TIGRFAM ID[TIGR01190] heme exporter protein CcmB 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000646849 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTGGAC TGACGTTGGG CGTGATCCGC CGCGAACTCG CGTTGACCTG GCGCAGGCGC 
ACGGTCACGC TCGGCAGCCT GATGTTCTTC GTGATTGCAT CGAGCCTTTT CCCGCTCGCC
GTAGGCCCCG ATCCGAAGCT TTTGCAGGCG ATCGCCCCCG GCGTGCTATG GGTCACCGCA
TTGCTCGCCG CGATGCTGTC GGCTGGGCAT CTGTTCGCTC AGGACTTCGC GAGCGGCACG
CTCGAACAGA TGCTGCTGTC GCCTTGGCCG CTACCTGGCA TCGTGTTCGG CAAGATCGTC
GCGCACTGGC TGACAGGCGG CCTCGCCCAG GTGCTGCTTG CACCGGTCGT GGCGCTGCAA
TACGAGCTCG GCTGGCGCGC TACGCTGCCG CTGATGGGCT CGCTGCTGCT CGGCACACCG
CTGCTGAGCC TGATCGGCTC GATGGGCGCG GCGCTGACAC TCGGCGTGCG CGGCGGCGGT
GTGACGCTCG CGTTGGTGAT CCTGCCGCTC TACGTCCCTG TGCTGATCTT CGGCGTCAGT
GCGTCCGATC CAGGGACAAG CGCAGCCTGG TCCAAAGCGA ACTTCTCGCT GCTTGGCGCA
GCGCTGTGCG CCGCCGGCTT GCTGTGTCCC TGGGCGAGCG CTGTGGCATT GCGAATCGCT
TTGGAGTGA
 
Protein sequence
MAGLTLGVIR RELALTWRRR TVTLGSLMFF VIASSLFPLA VGPDPKLLQA IAPGVLWVTA 
LLAAMLSAGH LFAQDFASGT LEQMLLSPWP LPGIVFGKIV AHWLTGGLAQ VLLAPVVALQ
YELGWRATLP LMGSLLLGTP LLSLIGSMGA ALTLGVRGGG VTLALVILPL YVPVLIFGVS
ASDPGTSAAW SKANFSLLGA ALCAAGLLCP WASAVALRIA LE