| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0318 |
|---|
| Symbol | |
|---|
| ID | 4009689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | - |
|---|
| Start bp | 344783 |
|---|
| End bp | 346450 |
|---|
| Gene Length | 1668 bp |
|---|
| Protein Length | 555 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637952964 |
|---|
| Product | putative AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_555584 |
|---|
| Protein GI | 91780377 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.00246923 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.308264 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCGC ATGTTTGGAC CGAAGTCACC CCGATCGGCG ATTTGCTGGT TCGTGCAGCC
AGCCGTCATC CCGACAGGGA CGCGGTCGTA TTTCCCGACG ATCGCTACAC CTATGCGGAA
GTTCTCAGGC GAGCGATGCT GGTGGCGCGC GGGCTTCTGA GCCTCGGAGT TCGACCGCGC
GACCACGTCG GCATCCTCTG CACCAACGGC ATCGAGTTCA TCGAAGGCTT GTTCGGAGTC
GCCCTGGCCG GGGCCGTTGC TGCGCCGATC AACGCCAGAT ACAAAGTGAA CGAACTCAAA
TACATCGCCT CGAACGCGGA CCTGGTGGCT ATCCTGACGA CCGGCGACGC AGACGCTTAC
GTCGACTTTC CAGACGTATT TGTCCAGGCC TTTCCCGAAC TGTCTTCGTC CGAGGCCTTG
GGGCTCGATT TGGAATCCGC TCCCCGATTG CGCAACGTGA TCCTGTTAAG CGGCAGTGAG
CGGCCCGGGT TCATCAGCCG CGAGCGCCTC CTGGAGCTTG CCGCGCGCGT GTCGGAGGAA
GACGTGCATG TTGCCCGCAG CCGCGTGCGC TTGCGCGATA TCGGCCTCCT TCTGTACACG
TCCGGGACGA CAGCCAATCC GAAAGGCTGC CTGCTGAGTC ATGAGGCCGT GACTCGCGGC
CCCGTCGAGC GGGCGACGAT ACGCTTCGGC CTCAAGGTTG CGGACGTCAC CTGGGGCGCC
GGGCCGCTGT TCCACATCGG CTCGCTGTCG CCGTTCCTCG GCTCGATCGG CGCGGCCGGG
ACCTACGTCA CCGATGCGTT CTTCGACGCG GGCCGTGCGC TCGATCTGTT GATCCGGGAA
AAGCCGACAG TCATGTTCCC ATGGTTCCCA GCCATCATGC AGGCGCTCAT GAATCACGAG
AAATGGGACC CTGCGAAGCT GTCGTCCGTT CGCTCCATTC TTCTGATCGG CCCGCGGCCT
TTGTTGGATA AAGTGCAGGC GGCGCTTCCG CAGGTGGAAC TGGTGGCCTC ATGCGGCATG
ACCGAGACGG CGGGAATCTA TGCCGTCAGT GATGTTTCGG AAACGGTCGA GCAACGAGCG
ACCGGTCACG GAAGGCCATG TTCAGGCATC GAGGCACGCA TCGTTAGTCT TTCAGATGGA
AGCGAGGTGA CTGACAGCAC GCCAGGCGAG ATTCTCCTGC GCGGGTATTG CGTGATGGAA
GGTTATTACC GCGATCCCGC CAATACCAGG AAAGCACTCG ATGCCGAGGG CTGGCTGCAC
ACCGGAGATC TTTACAGCCG TACTCCCGAT GGTCGATTGA TGTTCCATGA TCGCATCAAG
GACATGTTAA AAGTCGGCGG CGAGAACGTG GCTCCAGCTG AAATAGAAAC ATTCCTGTGC
ACCCATCCCT CCGTGGTCAT GGCGTCGGTC GTGGGCATCG CGGACGCGCG GCTCGACGAG
GTGCCTGTGG CGTTTGTCGA ACTTGCCGCC GGCAACACCC TGGAAGCCGA ATTTCTGATC
TCGTTCTGCC GGGGTCAGCT CGCCAGCTTC AAGATTCCTC GCCGAATACA TTTTGTTGAT
ACCGGCACCT GGCCGATGTC AACGACGAAG ATCGACAAGC GGCAGTTACG CGAACGGGCA
GCAAAAATGC ACGTTGAACA CATCTCCTCA GAGCGGGGTC TGACGTGA
|
|---|
| Protein sequence | MSAHVWTEVT PIGDLLVRAA SRHPDRDAVV FPDDRYTYAE VLRRAMLVAR GLLSLGVRPR
DHVGILCTNG IEFIEGLFGV ALAGAVAAPI NARYKVNELK YIASNADLVA ILTTGDADAY
VDFPDVFVQA FPELSSSEAL GLDLESAPRL RNVILLSGSE RPGFISRERL LELAARVSEE
DVHVARSRVR LRDIGLLLYT SGTTANPKGC LLSHEAVTRG PVERATIRFG LKVADVTWGA
GPLFHIGSLS PFLGSIGAAG TYVTDAFFDA GRALDLLIRE KPTVMFPWFP AIMQALMNHE
KWDPAKLSSV RSILLIGPRP LLDKVQAALP QVELVASCGM TETAGIYAVS DVSETVEQRA
TGHGRPCSGI EARIVSLSDG SEVTDSTPGE ILLRGYCVME GYYRDPANTR KALDAEGWLH
TGDLYSRTPD GRLMFHDRIK DMLKVGGENV APAEIETFLC THPSVVMASV VGIADARLDE
VPVAFVELAA GNTLEAEFLI SFCRGQLASF KIPRRIHFVD TGTWPMSTTK IDKRQLRERA
AKMHVEHISS ERGLT
|
|---|
| |