Gene Bxe_C0186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0186 
Symbol 
ID4009734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp207224 
End bp207931 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content58% 
IMG OID637952841 
Producthypothetical protein 
Protein accessionYP_555461 
Protein GI91780254 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.348065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.468061 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCACA CCATGAGCAA CCCGAAGCTT GAAGTTCTGA CTCCCGCTAA CAGCCAGATC 
ATTTTCATCG ACCAGCAACC CCAAATGGCG TTTGGCGTTC AATCCATTGA CCGCCAGGTA
TTGAAGAATA ATGTTGTCGG CCTCGCCAGG GCGGCCAGCG TATTCAATAT TCCCACTACC
ATCACGACGG TCGAAACCGA GAGCTTCTCT GGTTATACCT ACCCCGAATT GCTGGACGTG
TTCCCCGGGC ATCCGCTGCT TGAGCGCACG TCGATGAACT CATGGGACGA TCAGAAGGTG
CGTGACGCGC TCGCGCAGAA TGGCCGCAAG AAAGTGGTGG TATCGGGCCT GTGGACCGAG
GTATGCAACA ACACCTTTGC GCTATGTGCG ATGGATGAGG GCGGCTATGA AATCTACATG
GTTGCCGACG CGTCCGGCGG CACGTCGAAA GAGGCGCACG ACTATGCGAT GCAGCGCATG
ATCCAGGCGG GCGTCGTGCC CGTGACGTGG CAGCAGGTTC TGCTGGAATG GCAACGCGAC
TGGGCGCACA AGGACTCTTA CGATGCGGTG ATGGCTATCG TCAGGGAGCA TTCCGGCGCA
TACGGCATGG GCGTCGACTA TGCGTACACG ATGGTCCACA AGGCCGCGCA GCGTGTGAGG
GACAAGCACG AAGTGCGCGC GCCGGTGCCC GCGCCGATAT CGAAGTAG
 
Protein sequence
MDHTMSNPKL EVLTPANSQI IFIDQQPQMA FGVQSIDRQV LKNNVVGLAR AASVFNIPTT 
ITTVETESFS GYTYPELLDV FPGHPLLERT SMNSWDDQKV RDALAQNGRK KVVVSGLWTE
VCNNTFALCA MDEGGYEIYM VADASGGTSK EAHDYAMQRM IQAGVVPVTW QQVLLEWQRD
WAHKDSYDAV MAIVREHSGA YGMGVDYAYT MVHKAAQRVR DKHEVRAPVP APISK