Gene Bxe_B2968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B2968 
SymbolprfC 
ID4006881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp65686 
End bp67287 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content63% 
IMG OID637949741 
Productpeptide chain release factor 3 
Protein accessionYP_552377 
Protein GI91777169 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG4108] Peptide chain release factor RF-3 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.720802 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTCT CCGAACTCAA ACGCCGCCGC ACGTTCGCGG TCATTTCCCA CCCGGACGCG 
GGTAAGACCA CGCTCACGGA AAAGCTGCTG CTGTTTTCGG GCGCGATTCA GATCGCCGGC
ACCGTGAAGG GCCGCAAGAG CAATCGCTAC GCAACGTCCG ACTGGATGGA GATCGAAAAG
CAGCGCGGCA TTTCGGTGGC GAGTTCGGTG ATGCAGTTCG AGTACGGCGA CGCCGTCATC
AATCTGCTCG ACACGCCGGG CCACGAAGAC TTCTCCGAAG ATACCTACCG CGTGCTGACC
GCGGTCGATG CGGCCGTGAT GGTGATCGAC GGCGCGAACG GCGTCGAAGC GCAAACGCTC
AAGCTGCTCG AAGTCTGCCG TAGCCGCAAG ACGCCGATCG TCACCTTCAT CAACAAGCTC
GACCGCGAAG TGCGCGAGCC GCTCGAACTG CTCGACGAAA TCGAGCAGCA TCTGGGCGTC
GCCGCCGTGC CGTTCACGTG GCCGATCGGC ATGGGCAAGG ATTTCCAGGG CGTCTACGAC
ATCCAGCGCG ATCAGGTGCG CCTGTTCCGC GCCGGCCAGG ACAAGGCGGG CGGCGAGGTC
GAAACGCTGC AGGCGCTCAG CGACGAAGAG GGCGAGCGCC GCTTCGGCCA TGCCTGGGTC
AAGGCGAAGG AAGAGATCGA TCTGATCACG GGCGCGTCGC CGGATTTCGA TCGTGAACAG
TTCCTCGCCG GTCAGCAATC GCCCGTGCTG TTCGGCTCGG CGATCAACAA CTTCGGCGTG
AAGGAAATTC TCGACGCACT GGTCGATCTG GCGCCGCCGC CTTCCATGCG CATGACGGTG
CAGCGTCCCG TGATGCCGGA CGAGCCGAAG TTCACCGGCG TCGTGTTCAA GGTGCAGGCG
AACATGGATC TGGCCCACCG CGACCGCGTG GCGTTCATCC GCGTGTGCTC GGGGCATTTC
GAACGCGGCA TGGCCGTGAA GGTGACGCGC ACGAGCAAGA CGTTCCGTGC GAACAACGTG
GTGACGTTCC TGTCGCAGCG CCGCGAGACG GTGAGCGAGG CGTATCCGGG CGACATCATT
GGTATTCCGA ACCATGGCAC GCTGAGTCTC GGCGACACGC TGACCGAAGG CGAGCAGTTG
CAATTCGTCG GCCTGCCGTT CTTCGCACCG GAAATTTTCC AGACGGTTGA AGTGGTCGAT
CCGATGCGCG CCAAGCAGCT CGGCGAAGCG CTCAAGCAAC TCGGCGAAGA AGGCGCGATC
CAGGTGTTCC GTCCAGAAGT GGGCGGTCTG ATGATTCTCG GCGCGGTCGG GCAATTGCAG
TTCGAAGTGG TGTCGCACCG TTTGTCGACC GAATATAAGG TCGACGTGCG CATGGCGCCG
GCGCGTTACC GCATGTCGCG CTGGGTAACC TGCGACGATG CCGCCGAACT GCGCCGCTTC
ACCGATTCAT ACGCGGCACG GATTGCGCTC GACGCTTCGG ATGCGCCGAC TTATCTGGCG
TCGCACGTGT CGGAGATCGA AGTCGCGCAG AAGGCCTGGC CGAAAATCGT CTTCAACGAA
TTGCGCGAGC ATTCTGGCGC GCCGTTCAAG AGGGCGATGT AA
 
Protein sequence
MSVSELKRRR TFAVISHPDA GKTTLTEKLL LFSGAIQIAG TVKGRKSNRY ATSDWMEIEK 
QRGISVASSV MQFEYGDAVI NLLDTPGHED FSEDTYRVLT AVDAAVMVID GANGVEAQTL
KLLEVCRSRK TPIVTFINKL DREVREPLEL LDEIEQHLGV AAVPFTWPIG MGKDFQGVYD
IQRDQVRLFR AGQDKAGGEV ETLQALSDEE GERRFGHAWV KAKEEIDLIT GASPDFDREQ
FLAGQQSPVL FGSAINNFGV KEILDALVDL APPPSMRMTV QRPVMPDEPK FTGVVFKVQA
NMDLAHRDRV AFIRVCSGHF ERGMAVKVTR TSKTFRANNV VTFLSQRRET VSEAYPGDII
GIPNHGTLSL GDTLTEGEQL QFVGLPFFAP EIFQTVEVVD PMRAKQLGEA LKQLGEEGAI
QVFRPEVGGL MILGAVGQLQ FEVVSHRLST EYKVDVRMAP ARYRMSRWVT CDDAAELRRF
TDSYAARIAL DASDAPTYLA SHVSEIEVAQ KAWPKIVFNE LREHSGAPFK RAM