| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2964 |
|---|
| Symbol | |
|---|
| ID | 4006788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 71907 |
|---|
| End bp | 72956 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637949745 |
|---|
| Product | ABC sugar transporter, periplasmic ligand binding protein |
|---|
| Protein accession | YP_552381 |
|---|
| Protein GI | 91777173 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTTCG CGAAAGAGCC GCACGCGGCT CGCCGTTTGT TCCGCAGTTC GCTATCCGCC
GCGGCGGCCG CCGTGTGTTT CGCCGGCCTC GGCGTAACAG GCGCCGCGCA AGCCGCCGAT
GCAGGCAAGA TCGGCCTCGA TCTGCCGCTG CTGACATCGC CGTTCTGGCA GTCGTACAAC
AACTATCTGC CCAAATACGC GAAGGACATG GGCCTCGACA TTCTTGCGCC GGTCAATTCG
AACGGCGATC CCGCGCAGCA GATCACGGAC ATGAACAACC TGCTGAACCT CGGTGCGAAG
GGCATCGTGG TCGGTCCGCT GGATTCGGCG GCCATCAGCC GTGCGCTCGA CGCCGCCGCG
GCGAAGAACG TGCCCGTGGT CGCCGTGGAC GTCGCGCCGA CGCAAGGCAA GGTGGCGATG
GTGGTGCGCG CCGACAATCG CGCGTATGGC GAGAAGGCCT GCAAGTACAT TGGCGATCAC
GTGAAGTCGG GCAAGGTCGT GCAGATCATG GGCGACCTCG CATCGGTCAA CGGACGCGAC
CGCTCCGAAG CCTTCCGCTC ATGCATGAAG GGTTATCCCG GCGTGTCGGT TCTGGAGATT
CCAGCGGCCT GGAAAGGCGA CGTGGCGGCC ACCGCGCTCG ACAGTCTGCT GACCGCGAAT
CCCGACGTGA AAGGCATCTA CATGCAGGCG GGCGGCGTGT ATCTTTCGCC GACGCTGCAA
ACCCTGCGCC GCAAGCAGAT GCTCTTTCCG GCCGGCGACC CGAAGCACGT GGTGATCGTC
AGTAACGACG GCATTCCTCA GGAGTTCGAC GCGATCCGCC GCGGCGATAT CGACGCGACC
GTGTCGCAGC CCGCCGATTC GTATGCGAAA TACGGGCTGT TCTATATCAA GGCGGCGTTG
GCAGGGCAGA CTTTCAAGCC GGGCCCGACC GATCACGGCA GCAACATCAT CCAGTTGGCG
CCGGGCGTGC TGGAAGACCA GTTGCCCGCG CCGCTCGTGA CCAAGTCGAA CGTCGACGAC
AAGGCCTTGT GGGGTAACAC GGTCAAATGA
|
|---|
| Protein sequence | MSFAKEPHAA RRLFRSSLSA AAAAVCFAGL GVTGAAQAAD AGKIGLDLPL LTSPFWQSYN
NYLPKYAKDM GLDILAPVNS NGDPAQQITD MNNLLNLGAK GIVVGPLDSA AISRALDAAA
AKNVPVVAVD VAPTQGKVAM VVRADNRAYG EKACKYIGDH VKSGKVVQIM GDLASVNGRD
RSEAFRSCMK GYPGVSVLEI PAAWKGDVAA TALDSLLTAN PDVKGIYMQA GGVYLSPTLQ
TLRRKQMLFP AGDPKHVVIV SNDGIPQEFD AIRRGDIDAT VSQPADSYAK YGLFYIKAAL
AGQTFKPGPT DHGSNIIQLA PGVLEDQLPA PLVTKSNVDD KALWGNTVK
|
|---|
| |